UFO07647.5prime Sequence
1149 bp (1039 high quality bases) assembled on 2011-07-08
> UFO07647.5prime
CAGTCGACATGGCGGAGGAGCTAAAAGTGTTCTTCGAAGAGTGTCGTGGA
CAAGGGTTTTCCGCAAAGGAAATGCTGGCTGTATGTCAACCTTTGATTTG
GAGAATCCGCTTGGCTCGAATCAAGAAATGGTTCTTCATCCTACTGCCCC
TGATGGTTATTTATCTGCTTTGGCTATGCAGTGACACCTTTTCTTGGTGG
CTAAGTGCCCTGGGTCGATTGGTGCTCATACAGATCCTTCCACTCTGGGA
TTGGCGGCCCTACTATCATGCCAAGTGCCTGATACCACGCGATCAAAGTG
TCCAAGAGCAGGCACCATCATTGGGTAAAGCGGAGACCTTGCGGCAGAAT
TGCGATCTCTGTGAAGGTTTGGAGGGAATAGGCACGGTTTCCAATGTAAG
CTACTCCTCCTTGGAGTCTTAGCACCTAGAACGTGGGCAACCAGTGATTA
TAACAGACACTGGACTGCAAACGGATGTTTTTAGTCTCCTAGAGCAAATA
GAGAAGAAGTCACCTCAGTGGCTAACCAGTGAACCTTGTGATGTTTCCAG
CAATCTGTTGCTGAGGAAACTTTTTAACCTAGAGGCGGCTCTGGATAAGA
TTCATTCCTGGCAGGGACAGACATCGAATTCTTGGCACCTTCAACTGAGG
AACTGCCAGAAGAAGGCGGTGAAGTCCTCTCGGCTTTTTCTGGATCGTCC
CTACTACTACCCACTTCACCTGGCCCCGTATTACTCCAGCTGGCTATTGG
CAGTCCATCAGCAAAAGCGAAACCAAGCCGATATATACGTGCGTGGCCTA
GTGCTCATCCAGCAACTGAGTGGCCACTTTGAGATGGTTCTCCATCCAAA
GAAGCCCTGCAATAAAGGATATGTCCAAGCTTGCGGATGCGACTGAATGC
AGGAGAAGGTCTGATCTTTACCACGGATATCTGGAGCCTAAGTTATGGTC
TGGAGAACCCCACGGAAAGCTGACCTCCCTGGCTAGCATTTTCGAAAAAA
GACTGGCAGCCGGCAAGCTTTTCTAGACCATTTCGTTTGGCGGCGCGGGT
CCAGGTAAGGTGTCATAATCATAATCATATCTTATTCATAATCCCCACCT
AAGCCTAGGAGAATCTTGTATGACTAGGCTGGAATCTCAACAATAAAAT
UFO07647.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:10:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30053-RA | 1088 | CG30053-RA | 17..1023 | 7..1012 | 4905 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:10:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12688798..12689439 | 1012..372 | 3020 | 99.1 | Minus |
| 2R | 25286936 | 2R | 12689495..12689860 | 372..7 | 1815 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:10:02 has no hits.
UFO07647.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:35 Download gff for
UFO07647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30053-RA | 12..1023 | 1..1012 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:09:22 Download gff for
UFO07647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30053-RA | 12..1023 | 1..1012 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:57:03 Download gff for
UFO07647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30053-RA | 12..1023 | 1..1012 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:57:03 Download gff for
UFO07647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12688786..12689438 | 373..1027 | 97 | <- | Minus |
| 2R | 12689495..12689864 | 1..372 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:09:22 Download gff for
UFO07647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8576291..8576943 | 373..1027 | 97 | <- | Minus |
| arm_2R | 8577000..8577369 | 1..372 | 98 | | Minus |
