UFO07648.5prime Sequence
1136 bp (1017 high quality bases) assembled on 2011-07-08
> UFO07648.5prime
CAGTCGACATGCTAAAGAGACCTGCGTTAGTTTATCGGTGCCTTCAGACT
TCTGTTAAAAGGTCCTACCATCTAAATGCACATGAACATTTAAGAAAAAA
AGAAATTCTCAAGCCCGAAAGCCAGCCTAGTCAAAAGCATAAGAAATTTG
GAGACGGCTCCATTGGAGTGATTCATGTGATCAAGAACGAATATTATGGG
CTCCCCAATCCCATGCACCGAAAATTCCGGGAAGATCTGGAGAAACACCA
AGACCGGAGGAAGGAATCAAACCTTTCGTTAAAGGAAGAAAAGCGTGAAG
ATCTTGAAAAGATGCTAAAGGAATGCCAGAAGCTTGTCAAAGAAATCACC
ATGCAGGCTAATGATGGCGATGTTACGAAGATCTGCAAGGAACTAGCCCA
AAAAGAAAAGATGGACAATTTAAAAATAAAGAAAAAGTGCCGAGAGCTGG
CAGCAAGAGAAAAATGTGAAAAGGATAAGCTGAAAAAGAAGTGCAAGAAG
TTGCTCAAGAAGGATAAGTGCAAGAAAAAAGATACTTGCGAAGAAGAGAA
GCCTTGTGAAGAAGAAGATCCTTGCGAGAAAAAAAGCTGTTGCCCCAAAG
ATCCTTGCGCTAAAAAACCCAAGAAAGTTGACCCCTGCAAAAAGAAAGAT
CCTTGCAAAAAAGAGGATCCATGCAAAAAGAAGGCTGTAAATTGGAAGAA
AAAGTGCAAGGAGGTTGCGGAGAGGGAGCAATGCAAAAAGCTGGCCGAGA
AGAAGAAGTTTAAGAAAATGATAAAAATATGCAAAAACCTTGCGGCGAAA
GGAAAAATGCAAAAAAATGGCCGAAAAAGAGATGTGCAGGAAAAAGGCCA
AAAAGGGGAAAAAGAACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGG
CCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATATCACAACT
AGCCTAGGAGATCCTGTCATGACTAGTGCTTGGATTCTCACCAATAAAAA
ACGCCCGGCGGCAACCGAGCGTTCTGAACAAATTCAGATGGAGTTTCTGA
GTCATACTGGATCTTATCACAGGGAGTTCAGCGAGCTCGGAATCAATACG
CCCCGCCCTGCCACTCATCGCAAGATACTGGTGTGT
UFO07648.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:10:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| djl-RA | 1098 | CG1984-RA | 125..981 | 9..866 | 4220 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:10:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7061038..7061802 | 101..866 | 3735 | 99.5 | Plus |
| 3R | 32079331 | 3R | 7060891..7060984 | 9..102 | 470 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:10:07 has no hits.
UFO07648.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:36 Download gff for
UFO07648.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| djl-RA | 125..985 | 9..871 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:09:24 Download gff for
UFO07648.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| djl-RA | 125..985 | 9..871 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:57:04 Download gff for
UFO07648.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| djl-RA | 125..985 | 9..871 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:57:04 Download gff for
UFO07648.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7060891..7060984 | 9..102 | 100 | -> | Plus |
| 3R | 7061040..7061806 | 103..871 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:09:24 Download gff for
UFO07648.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2886613..2886706 | 9..102 | 100 | -> | Plus |
| arm_3R | 2886762..2887528 | 103..871 | 99 | == | Plus |
