UFO07656.5prime Sequence
1130 bp (1021 high quality bases) assembled on 2011-07-08
> UFO07656.5prime
CAGTCGACATGGCTAATCCGTTTCGCTGGTGTCGAGTGTCGCACGACTGC
GTGTTCCAGATTAATGTGGTTCTGGTGGTGGTCGGAGTGATCTTTCTGCT
TGACGTGCTCAGCCACCTTTATCTGAAGGCGGTCATGTTTCCAGGCCTTC
GTCTATACCCGGTAGCCTTGCGCCCCTGGCTCTTTTGGGTGCGCGCTTTG
ACAATGGTTGCCTACATTTTGAACGCTGTTCTTGGGATTCACATGGCCCG
ACAACCCACCGTCTTGAAGTACGCTGGCTATATGCTCGTTGGAAGCGTGG
TGTTGCTGTACACAATAAGCATCGGAGTGACTCGCTTCATGTACCGCAAA
AGATTCGAGTTCTTTGCCGAGATGCTGGTGCTGCAGATGTGGGTGAGAGA
TAGACTTGGCAAGGTTGTAGTATAGTTCGAGTGCTGCGGAAGGTCCAGCG
TAGTTGACTACCAGACAGCATCGAGCAACCGCACCTGGCCCATTGGCTCT
TGCTGCGGGAAGCAGAACTGCACCGGCTGCACTGCGAAGCTTAGCCAGTA
CCTGTGGACTATCGAGATGGATGTGGCAAGGGATAATATTATCGTATCCG
TTCTCTTGTTTGTGGCGATGATCGTCATGGTTTTACACTTTAAAGATGTG
CAATCGCTCGACGACACTAGTGATGTGGATGAGTCTTCAGAACTGGTAGA
CGACTCGGACGCCAAAGAAGCAAGCTTTCTAGACCATTCGTTTGGCGCGC
GGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCAC
AACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAAT
AAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTT
CTGAGGTCATTACTGGATCTATCACAGGAGTCCAAGCGAGCTCGATATCA
ATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAGCA
TTCTTGCGAAATGGAAGCCATCACAAACCGCATGATGACCTGAATCCCCA
GCGGCATCAGCACCTTGTCGCCCTGGTATAATATTTGGCCATTGTGAACC
GGGGCGAGAGCTGTTCCAATTTGCCACGGT
UFO07656.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:08:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tsp42A-RB | 1179 | CG14468-RB | 57..771 | 5..719 | 3530 | 99.6 | Plus |
| Tsp42A-RA | 936 | CG14468-RA | 57..771 | 5..719 | 3530 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:08:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 5795469..5796183 | 5..719 | 3530 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:08:15 has no hits.
UFO07656.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:20 Download gff for
UFO07656.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tsp42A-RA | 53..776 | 1..725 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:08:33 Download gff for
UFO07656.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tsp42A-RA | 53..776 | 1..725 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:56:21 Download gff for
UFO07656.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tsp42A-RA | 53..776 | 1..725 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:56:21 Download gff for
UFO07656.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 5795465..5796188 | 1..725 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:08:33 Download gff for
UFO07656.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 1682970..1683693 | 1..725 | 99 | == | Plus |
