UFO07658.5prime Sequence
1056 bp (979 high quality bases) assembled on 2011-07-08
> UFO07658.5prime
CAGTCGACATGGGACAGCCCGGTTTCCGTCGTGCCATTGGGCACGTTTCG
TTGGTGGTGGCACTGATGTGCACCACCTGTTTCCAAGTGGAAGGACTACC
CCATCCGCCGGCCACGTCGCCGTCACCAATGATGGAAAGAATGGTGGAGC
AGGCCTACGACGATAAGTTCGACAACGTCGATCTGGACGAGATCCTTAAC
CAAGAGCGACTGTTGATCAACTACATAAAGTGCCTGGAGGGCACAGGTCC
TTGCACTCCCGATGCCAAGATGTTGAAGGAGATCCTGCCCGACGCCATCC
AAACCGATTGCACCAAGTGCACGGAGAAGCAGCGGTATGGTGCTGAAAAG
GTGACCCGTCATCTCATCGACAACCGACCCACCGACTGGGAGCGTCTGGA
AAAGATCTACGATCCCGAGGGAACCTACCGCATCAAATACCAGGAGATGA
AGTCCAAGGCCAATGAGGAGCCAGCAAGCTTTCTAGACCATTCGTTTGGC
GCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAA
TCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCAC
CAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGG
AGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGA
TATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCA
TTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTG
AATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCA
TGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCA
AAACTGGTGAACTCACCCAGGGATTGGCTGAGACGAAAAACATTATTCTC
AATAAACCCTTTAGGTAATAGGCCAGGTTTTAACGTACACGCCACATCTG
GCGAATAATATGTGTAGAACTGCGGAATCGTCGTGTTATCACTCCCAGAG
CCGATG
UFO07658.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:07:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| a10-RA | 567 | CG6642-RA | 21..485 | 9..473 | 2325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:07:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17023451..17023721 | 279..9 | 1355 | 100 | Minus |
| 3L | 28110227 | 3L | 17023205..17023399 | 473..279 | 975 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:07:47 has no hits.
UFO07658.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:16 Download gff for
UFO07658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| a10-RA | 11..488 | 1..477 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:08:21 Download gff for
UFO07658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| a10-RA | 11..488 | 1..477 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:56:12 Download gff for
UFO07658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| a10-RA | 11..488 | 1..477 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:56:12 Download gff for
UFO07658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17023205..17023398 | 280..473 | 100 | <- | Minus |
| 3L | 17023451..17023729 | 1..279 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:08:21 Download gff for
UFO07658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17016305..17016498 | 280..473 | 100 | <- | Minus |
| arm_3L | 17016551..17016829 | 1..279 | 98 | | Minus |
