UFO07660.5prime Sequence
1137 bp (1023 high quality bases) assembled on 2011-07-08
> UFO07660.5prime
CAGTCGACATGATCAAGAACGCCGTTTCCCTGGTGACCGGAGGAGCCTCT
GGACTGGGCCGCGCCACCGCCGAGCGCCTGGCCAAGCAGGGCGCCAGCGT
GATCCTGGCCGATCTGCCCTCCTCCAAGGGCAACGAGGTGGCCAAGGAGC
TGGGCGACAAGGTGGTCTTCGTGCCCGTGGACGTGACCTCCGAGAAGGAT
GTGAGCGCCGCTCTGCAGACGGCCAAGGATAAGTTCGGTCGTCTGGATCT
GACTGTGAACTGTGCGGGCACAGCCACCGCGGTAAAGACGTTCAACTTCA
ACAAGAACGTGGCGCACCGCCTGGAAGACTTCCAGCGGGTGATCAACATC
AATACCGTGGGCACGTTCAATGTGATCCGTCTGTCCGCCGGACTGATGGG
CGCCAATGAGCCCAATTTGGATGGACAGCGCGGCGTGATCGTGAACACCG
CCTCGGTGGCTGCCTTTGATGGCCAGATCGGCCAGGCGGCCTACTCCGCC
TCCAAGGCAGCCGTGGTGGGCATGACCCTGCCCATTGCCCGTGACTTGAG
CACCCAGGGCATACGTATCTGCACCATTGCACCGGGTTTGTTCAACACGC
CTATGCTGGCCGCCCTGCCGGAGAAGGTGCGCACCTTCCTGGCCAAGTCC
ATACCGTTCCCGCAGCGCCTGGGCGAGCCCAGTGAGTACGCCCACCTGGT
GCAGGCCATCTACGAGAATCCGCTGCTCAACGGCGAGGTCATCCGTATCG
ACGGTGCTCTGCGCATGATGCCCGCAAGCTTTCTAGACCATTCGTTTGGC
GCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAA
TCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGATTCTCACC
AATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGA
GTTCCTGAGTCATTACTGGATTTTATCAACAGGAGTCCAAGCGAGCTCGA
TATTCAAATTACGCCCCCGCCCTGCACACTCATCGCAGAACTGTTTGTAA
TTTCATAAGCATTTCTTGCCGACATTGAAGCATCACAACGGCATGATGAA
CTGATCCCGCGGGATACAGACTTGTCGCCTTGCGATT
UFO07660.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:07:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| scu-RA | 1034 | CG7113-RA | 124..888 | 9..773 | 3795 | 99.7 | Plus |
| scu-RB | 1134 | CG7113-RB | 232..988 | 17..773 | 3755 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:07:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18091950..18092707 | 16..773 | 3760 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:07:56 has no hits.
UFO07660.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:18 Download gff for
UFO07660.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| scu-RA | 126..901 | 1..773 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:08:25 Download gff for
UFO07660.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| scu-RA | 124..899 | 1..773 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:56:15 Download gff for
UFO07660.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| scu-RA | 113..888 | 1..773 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:56:15 Download gff for
UFO07660.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18091950..18092706 | 16..775 | 99 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:08:25 Download gff for
UFO07660.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17985983..17986739 | 16..775 | 99 | <- | Plus |
