UFO07662.5prime Sequence
1124 bp (1008 high quality bases) assembled on 2011-07-08
> UFO07662.5prime
CAGTCGACATGGGACGCAAAGGCCACAAGACTAGAAGGAAAGTTAAAGTC
CACTCGAAGGTCCATCCTCCTCAGAAAATTAAAGCGAAGCTGCCGAAAAG
AGATAAACGTAGCACACTTCGTCCCAAGATTAATAATTCGAAGGTTTTTC
ACGTGAACTGCTGCAAGTACAAGATCCGTTCGAGACCCATGAGGCGCAAT
CAGTGCAACCTGGCCACCCAGTGCCCCTCCCACACGGTCGCCATCGCCCC
GTCTGTGCCGCTCCTGCATCATCCTGTCCGGCGGAAGGTGGTCCATATGC
CGGAAACCGTGGTCATGCACATGCGGAATATGGAGGACGCCCGCCGAGTG
GCGGTTAAGCACAGAAGAACCCTTATTCAAACCCATGTTCCTTCGCCGGA
TGTGGATGATGACGAAGATTTTTTACCAAATCGATCGGAGGTCAAGGCAA
GCCTATAGGATGGGTCAAATGAGACCCTTATCCAGCGACGTGGATGTGGA
TGACATGGATGTGGACCCGTTTCAGGCAAGCTTTCTAGACCATTCGTTTG
GCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCAT
AATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTC
ACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGAT
GGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTC
GATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATT
CATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACC
TGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATATATTTGCCC
ATGGTGAAAACGGGGGCGAGAGTTGTCCATATTGGCCACGTTTAAATCAA
AACTGGTGAAACTCCCCCAGGGATTGGCTGAGACGAAACATATTCTCATA
ACCCTTTAGGAATAGGCCAGTTTTCACGTAACACGCCCATCTTGCGAATA
TATTGTGTAGAAACTGCGAAATCTGCTCGTGTGTCTGTGTGTGTTAATTT
CACACACCTCGAGGTAGTAAACGT
UFO07662.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:10:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13541-RB | 1528 | CG13541-RB | 78..593 | 9..525 | 2500 | 99 | Plus |
| CG13541-RA | 986 | CG13541-RA | 78..593 | 9..525 | 2500 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:10:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23284304..23284819 | 9..525 | 2475 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:10:54 has no hits.
UFO07662.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:43 Download gff for
UFO07662.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13541-RA | 18..540 | 1..525 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:09:44 Download gff for
UFO07662.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13541-RA | 71..593 | 1..525 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:57:23 Download gff for
UFO07662.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13541-RA | 71..593 | 1..525 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:57:23 Download gff for
UFO07662.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23284297..23284819 | 1..525 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:09:44 Download gff for
UFO07662.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19171820..19172342 | 1..525 | 98 | == | Plus |
