Clone UFO07667 Report

Search the DGRC for UFO07667

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:76
Well:67
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO07667.5prime Sequence

1160 bp (1015 high quality bases) assembled on 2011-07-08

> UFO07667.5prime
CAGTCGACATGCTCCTAATTGGATTACTAATGCTACTCCATGCCGGCCTC
CAAGGAGCCCAGTGTGTTGCCTTCTACACGGAAAAACCCTCCTATATTGA
GTCCTGCAAGATTTATGAACCGGAGTTCACCAAGTGCTCAACTCGTTCAA
TACAGGCATTTATGAACCAGCTCGTCAAAGGTGTGCCCGAAATAGAGGAA
TCCTTTGGACCCATCGATCCCATGAGGCAGGAACAGCTGGTGTTCAAGCA
GGATAACAGCGACGTGGCCACCCTTTCCGCCAATCTTACGGATATGCTGA
TCAGGGGCTTTGGCAAAATGCTGATCAAGGAGAGCAAAGTCAGCAAAAAG
GATTTCAGCTGGCTAACTAAGATCTACCTGCCCCAAATGCGAATAGATGG
TCACTACAAAATGGTCGGTCGCTTTTTGCTCGTGCCTCTGCAGGGAAATG
GAAAAATAGTCATGGAAATAGATGATCTGGACATACTGATGACCACCAAA
ACACGCCTCTACGAGAAGGGCGGCTATACATTTTACAACGTGACATCCGT
GAAGGTAAAAGTGGACGTCGGCAAAGTTCGCACCAGATTGGATAACCTCT
TCAACGGGCACAGCAAGGAGGTGGAAGATAGCACCAATCAGTTCTTTAAC
GACAATTGGAAGGATGTCTTCGAGGCACTGCGTCCGCTGGTGGTTGAAAC
CGTGGAAAGAACGCTACTAGATCTACTCCACAAGACATTTGCCCTGTTTC
CGGCCAGCTTCTTTGTGGAGGACATACCCACCTCCTTAACCTTGTATGGT
CGCAAGTCACACATGATCACTGCAAGCTTTCTAGACCATTCGTTTGGCGC
GCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATC
ACAACTAGCCTAGGAGATCCTGGTCATGACTAGGGCTTGGAATTCTCACC
AATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAATCCAGATGGAG
TTCTGGAGGTCATTACTGGATTTATCACAGGGAGTCCAAGGCGGGCTCGA
ATATCAAATTACGCCCCGCCCTGCCACTTATCGCCAGTACTGGTTTGTAA
TCATTAAGCATTCTGGCGGACTGGAAAGCAATCCAACGGCATGGATTGAG
CTGAATCGCA

UFO07667.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:11:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG17189-RA 995 CG17189-RA 71..884 8..821 4040 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:11:11
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 27102455..27102806 470..821 1760 100 Plus
3R 32079331 3R 27101823..27101981 179..337 795 100 Plus
3R 32079331 3R 27102263..27102396 338..471 640 98.5 Plus
3R 32079331 3R 27101673..27101768 88..183 480 100 Plus
3R 32079331 3R 27101476..27101555 8..87 400 100 Plus
Blast to na_te.dros performed on 2014-11-27 00:11:12 has no hits.

UFO07667.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:46 Download gff for UFO07667.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17189-RA 63..896 1..831 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:09:51 Download gff for UFO07667.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17189-RA 63..896 1..831 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:57:29 Download gff for UFO07667.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17189-RA 63..896 1..831 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:57:29 Download gff for UFO07667.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 27101468..27101555 1..87 95 -> Plus
3R 27101673..27101765 88..180 100 -> Plus
3R 27101825..27101981 181..337 100 -> Plus
3R 27102263..27102396 338..471 98 -> Plus
3R 27102457..27102818 472..831 98 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:09:51 Download gff for UFO07667.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22927190..22927277 1..87 95 -> Plus
arm_3R 22927395..22927487 88..180 100 -> Plus
arm_3R 22927547..22927703 181..337 100 -> Plus
arm_3R 22927985..22928118 338..471 98 -> Plus
arm_3R 22928179..22928540 472..831 98 == Plus