UFO07667.5prime Sequence
1160 bp (1015 high quality bases) assembled on 2011-07-08
> UFO07667.5prime
CAGTCGACATGCTCCTAATTGGATTACTAATGCTACTCCATGCCGGCCTC
CAAGGAGCCCAGTGTGTTGCCTTCTACACGGAAAAACCCTCCTATATTGA
GTCCTGCAAGATTTATGAACCGGAGTTCACCAAGTGCTCAACTCGTTCAA
TACAGGCATTTATGAACCAGCTCGTCAAAGGTGTGCCCGAAATAGAGGAA
TCCTTTGGACCCATCGATCCCATGAGGCAGGAACAGCTGGTGTTCAAGCA
GGATAACAGCGACGTGGCCACCCTTTCCGCCAATCTTACGGATATGCTGA
TCAGGGGCTTTGGCAAAATGCTGATCAAGGAGAGCAAAGTCAGCAAAAAG
GATTTCAGCTGGCTAACTAAGATCTACCTGCCCCAAATGCGAATAGATGG
TCACTACAAAATGGTCGGTCGCTTTTTGCTCGTGCCTCTGCAGGGAAATG
GAAAAATAGTCATGGAAATAGATGATCTGGACATACTGATGACCACCAAA
ACACGCCTCTACGAGAAGGGCGGCTATACATTTTACAACGTGACATCCGT
GAAGGTAAAAGTGGACGTCGGCAAAGTTCGCACCAGATTGGATAACCTCT
TCAACGGGCACAGCAAGGAGGTGGAAGATAGCACCAATCAGTTCTTTAAC
GACAATTGGAAGGATGTCTTCGAGGCACTGCGTCCGCTGGTGGTTGAAAC
CGTGGAAAGAACGCTACTAGATCTACTCCACAAGACATTTGCCCTGTTTC
CGGCCAGCTTCTTTGTGGAGGACATACCCACCTCCTTAACCTTGTATGGT
CGCAAGTCACACATGATCACTGCAAGCTTTCTAGACCATTCGTTTGGCGC
GCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATC
ACAACTAGCCTAGGAGATCCTGGTCATGACTAGGGCTTGGAATTCTCACC
AATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAATCCAGATGGAG
TTCTGGAGGTCATTACTGGATTTATCACAGGGAGTCCAAGGCGGGCTCGA
ATATCAAATTACGCCCCGCCCTGCCACTTATCGCCAGTACTGGTTTGTAA
TCATTAAGCATTCTGGCGGACTGGAAAGCAATCCAACGGCATGGATTGAG
CTGAATCGCA
UFO07667.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:11:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17189-RA | 995 | CG17189-RA | 71..884 | 8..821 | 4040 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:11:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 27102455..27102806 | 470..821 | 1760 | 100 | Plus |
3R | 32079331 | 3R | 27101823..27101981 | 179..337 | 795 | 100 | Plus |
3R | 32079331 | 3R | 27102263..27102396 | 338..471 | 640 | 98.5 | Plus |
3R | 32079331 | 3R | 27101673..27101768 | 88..183 | 480 | 100 | Plus |
3R | 32079331 | 3R | 27101476..27101555 | 8..87 | 400 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:11:12 has no hits.
UFO07667.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:46 Download gff for
UFO07667.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17189-RA | 63..896 | 1..831 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:09:51 Download gff for
UFO07667.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17189-RA | 63..896 | 1..831 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:57:29 Download gff for
UFO07667.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17189-RA | 63..896 | 1..831 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:57:29 Download gff for
UFO07667.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27101468..27101555 | 1..87 | 95 | -> | Plus |
3R | 27101673..27101765 | 88..180 | 100 | -> | Plus |
3R | 27101825..27101981 | 181..337 | 100 | -> | Plus |
3R | 27102263..27102396 | 338..471 | 98 | -> | Plus |
3R | 27102457..27102818 | 472..831 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:09:51 Download gff for
UFO07667.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 22927190..22927277 | 1..87 | 95 | -> | Plus |
arm_3R | 22927395..22927487 | 88..180 | 100 | -> | Plus |
arm_3R | 22927547..22927703 | 181..337 | 100 | -> | Plus |
arm_3R | 22927985..22928118 | 338..471 | 98 | -> | Plus |
arm_3R | 22928179..22928540 | 472..831 | 98 | == | Plus |