UFO07668.5prime Sequence
1137 bp (1027 high quality bases) assembled on 2011-07-08
> UFO07668.5prime
CAGTCGACATGCAGAGGATAATCGCTTTGGTGGCCATCATGGCGTGTGGA
CTATCGTTCGTGGCAGCTCAGTCATGTCAGACTTGTCTGGAGCAAAACGA
TGTGTACTGCGTTGATCAGAACAGCTATCAGAATTGCATGAAAAATGGTC
CAGTTGGAGATATTATCGAATGTCCTTCGGGCACCGTTTGCTCCAATTCT
GATAGCGTTTGTGCTCTGATCTCCGAGGTAAATTCGACCATATTGGACGT
GTGTGGAGGCTCTGGCGGAAATGGAGCTCAGTGCGAAGTGTGTTCCTCAG
GCGCCAAATACGCCTGTGTCAGCAGCACCCAGTATGCCCGCTGCTCCTCC
GCCGGCGATGTGCTGACCAGCAGTGTGTACAATTGCGGCACAGATGAGAT
TTGTATCATAGATGCTCTGTCGACGTATCAAACCGTCTGTGTACCGTCTT
GTGCCTCCGAATTTCTTGGATTGGATGCCACCTGTAGCAACAGTATTTAT
CAGCCAACCACAACAACTACAGTGGCTCCAACGACAACTCCTAGTGCTGC
GCAGAAAGAGGATTTGTGCAATGCTGGCGAGCCTAGTACCAATCCTAGTT
ACTTCTTTACCAGAATAACCGATGACTCCACGTGCAACAGCTACCTGTAC
TGCCAGAAATCTGGAACCACCTGGGTTGCCCTCTATATGACTTGCGGCGC
CTCCACGCCGTTCTTTGATTCAACCACCAGCTCATGTGTGACAACCAGGC
CGACCAGCTGCTCGGATACAACGACTCAGTCGCCCTCTGATTCTTCATCG
ACTGCTTCTTCAACTGAGTCCTCCTCCGAGTCTTCATCAACGACTGCTTC
ATCCACAGCTTCCTCATCAACGGAATCTACACCAACGACTGCGTCCTCGT
CGGCTTCTTCATCTACGGAATCTCCACGAGTCTTCTTCACGACTGCTTCC
ACCACGCAGTCTTCTTCTACGGAATCATCCACACAGTCTACTCACACTTC
TACGACTACTCCTACCTCCTGCAAGCTTTCAGACAATTCGTTTGGCGGGC
CGGGCCCAGGATAGTGGTCTAATCAATTCATATCTAATTCTTAATCCACT
AGGCTAGAGATCCCTGTCATTGACAGCTTGAATTCCA
UFO07668.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:11:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13075-RB | 1149 | CG13075-RB | 42..1056 | 7..1015 | 4925 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:11:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16084615..16085171 | 465..1015 | 2505 | 98.7 | Plus |
| 3L | 28110227 | 3L | 16084238..16084560 | 142..464 | 1615 | 100 | Plus |
| 3L | 28110227 | 3L | 16084034..16084168 | 7..141 | 675 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:11:17 has no hits.
UFO07668.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:47 Download gff for
UFO07668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13075-RB | 37..1065 | 1..1026 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:09:53 Download gff for
UFO07668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13075-RB | 37..1065 | 1..1026 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:57:31 Download gff for
UFO07668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13075-RB | 37..1065 | 1..1026 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:57:31 Download gff for
UFO07668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16084029..16084168 | 1..141 | 97 | -> | Plus |
| 3L | 16084238..16084560 | 142..464 | 100 | -> | Plus |
| 3L | 16084615..16085180 | 465..1026 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:09:53 Download gff for
UFO07668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16077129..16077268 | 1..141 | 97 | -> | Plus |
| arm_3L | 16077338..16077660 | 142..464 | 100 | -> | Plus |
| arm_3L | 16077715..16078280 | 465..1026 | 98 | | Plus |
