UFO07672.5prime Sequence
1140 bp (1045 high quality bases) assembled on 2011-07-08
> UFO07672.5prime
CAGTCGACATGCGCAACGCCCATCCACAGCTGGAGCAACTGCAGCAGGAG
CTGCGCGACCTAATCTGCGAGCTGTGCAACCGGCAGTACAGCACAAAGAA
TGCCTTGGGCGAGCATTTAAAGCGTCATGCCCAGCGCAAGGAGCACGTGT
GCGAGCACTGTGGAGTGGCCAAGGTGACCCGAACGGAGCTACTGACCCAC
CTGCGCACCCACAATCCCACCTGGGAGCGCTTCAAGTGCGAGCAGTGTCC
GCAGCTCTTTCGCCACAAGAGCGCCATTAGCCGGCATGTTCGGGTGGTCC
ACGAGGGTCAGCGGCGGTTCCAGTGCGGTCATTGCGAGAAAAAGTTTGGC
ACGCATGCCTCGCAGGTGCGGCACGAGCGGCTGCACACGGAATCCACGGG
CTCGGGAGAGGCAGCCGAGGAATGGCCCTTTGCCTGTATTCACTGCCAGA
AGCCTTGCGTTTCGCGACAAACCCTTGAGTTGCACCTACGAAGGCACCGC
GCGAGAAAGACGCACAGAAAACGAAGGGAGCACAGTCGGGAGAGTCAGGA
GCAGGAGCAGGAGCACGACCGCGATCAGGAGCAGGGCGCTCGGGAAGCTC
AACAGGATCAGCTCCGCAAGGGGGAAAAGCTACGGCAGAGAGATCTCTCC
AGGGAAAGCCACCGAAATGAGGTGACCATGCAGACAAGCCAGCGGCCAAA
TGAGTGTCAACAAGGTCAAGAGTCCTACGATCCGGAACCGGATCCGCTGG
AGGCAAGTCAGTGCAAGCTAGAGCAGGAAGATGCACTCGATCCGGAATGG
CAGCACAAAATAGAGCAGACGCAGAATCGCAAGACTCGGCGCGACTGGAA
GGCATTTCCATGACTACAAACCTATCCCTTCGAAAGCCTTAGCAAGCTTT
CTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAA
TCATAATCATAATCATAATCACAACTAGCCTAGAGATCCTGGTCATGACT
AGTGCTTGGATTCCTCACCAATAAAAAACGCCGGCGGCAACCGAGCGTTC
TGAACAAATCGATGGAGTCTGAGTCATACTGGATCTATCAACAGGAGTCA
AGGCGAGCTCGATATTCCAAATACGCCCCCGCCCTGGTAC
UFO07672.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:10:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1529-RD | 3235 | CG1529-RD | 741..1627 | 7..891 | 4385 | 99.8 | Plus |
| CG1529-RC | 1815 | CG1529-RC | 741..1627 | 7..891 | 4385 | 99.8 | Plus |
| CG1529-RA | 3246 | CG1529-RA | 752..1638 | 7..891 | 4385 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:10:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21030260..21031146 | 891..7 | 4335 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:10:49 has no hits.
UFO07672.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:43 Download gff for
UFO07672.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1529-RB | 746..1648 | 1..898 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:09:41 Download gff for
UFO07672.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1529-RA | 745..1647 | 1..898 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:57:20 Download gff for
UFO07672.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1529-RA | 745..1647 | 1..898 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:57:20 Download gff for
UFO07672.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21030251..21031148 | 1..898 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:09:41 Download gff for
UFO07672.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20901278..20902175 | 1..898 | 98 | | Minus |
