Clone UFO07685 Report

Search the DGRC for UFO07685

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:76
Well:85
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG17698-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO07685.5prime Sequence

1126 bp (1011 high quality bases) assembled on 2011-07-08

> UFO07685.5prime
CAGTCGACATGAAAATTCTTTCAAAAAAACGTCTCCTGCGTCAAGCTGGT
CTTATGCGGCGAGGACCTCGGAAAGCAACATCACCTCTAGATCGAGTTTA
CAGAGAAATAGCAGTTTTAAAGAAACTTGATCATCCAAACGTCGTAAAGT
TGGTAGAAGTGCTGGATGACCCACTTGAAGATTCATTATATATGGTTTTT
GAATTGGTAAAACAAGGTGAAGTTCTTAGGATTCCAACAGATAATCCCTT
GTCTGAAAAAAGGGCTTGGAGTATATTTCGGGAGTCTTTACTTGGATTGG
AATATTTGCATCATCAAAAAATTATCCATGCCGACATTAAGCCTGGAAAT
TTATTATTAACTGAATTTGGACATGTAAAAATAGCTGATCTTGGCGTATG
CAATGAGTTCCTTGGAGATGATGCAACAATAAGTAATGGATCAACGGCTG
GAACTCCAGCTTTCAGGGCTCCTGAAACTCTTATCCCTGGACAGAACGAA
TATTGTGGCAGGGCGGCAGATGTCTGGGCCTTAGGCGCTACTCTATATTC
CTTAATATTCGGAAATGTGCCGTTTCTAGCTGATTCAGTACCCTTACTGT
ATGAAAAAATTAAACAAGATTCTGTCAAATTTCCAGAAAACCACAAAGTA
ACTGAAAATTTAAAAAGTTGCATAGTTCAAATGTTGGAAAAGAATCCGAC
GCAGAGAATTACTATTCCCCAGTTAAAGACTAGTAAATGGGTAACTTCTG
ATGGGGACTATCCCTTGCCGACCGAAGAAGAAAATTGTTGCTTGGGTACA
AGTAGACGACGAAGATATAGACTCCGTCGTGCGCAGCATTCCTAAATTGG
ACACACTTATATTAATTAAAACAATGTTAAAAAAGCATTCATTTGGCAAC
CCGTTTGTAAAGGATGTTCTGGAACATCATCATCGCTCGCGGGCTGCTCG
AGGATGAAAGGTCATACGCGCAGGTCGATCTAATTCAGCACCTGGTTCAT
ATCATATGGTCAACAGGCCAGACAGCCTTCGTCGGAAACTCTCTGCCATC
ACTAATGGAACATTGCTCTAGTCATGTAATGATGAACCTCATAAGTTGGA
TAGCCAGCCTTTCAGAACCATCGTTG

UFO07685.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:07:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG17698-RD 2506 CG17698-RD 1207..2293 9..1093 5160 98.7 Plus
CG17698-RA 1582 CG17698-RA 283..1369 9..1093 5160 98.7 Plus
CG17698-RF 2560 CG17698-RF 1559..2347 307..1093 3670 98.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:07:03
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 23746247..23746544 9..306 1490 100 Plus
3L 28110227 3L 23748422..23748705 727..1008 1210 98.2 Plus
3L 28110227 3L 23748138..23748373 493..728 1180 100 Plus
3L 28110227 3L 23747873..23748060 307..494 940 100 Plus
3L 28110227 3L 23748770..23748845 1020..1093 205 90.8 Plus
Blast to na_te.dros performed on 2014-11-27 00:07:04 has no hits.

UFO07685.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:11 Download gff for UFO07685.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17698-RB 1209..2295 9..1093 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:08:02 Download gff for UFO07685.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17698-RA 283..1369 9..1093 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:55:52 Download gff for UFO07685.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17698-RA 283..1369 9..1093 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:55:52 Download gff for UFO07685.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 23746247..23746544 9..306 100 -> Plus
3L 23747873..23748060 307..494 100 -> Plus
3L 23748140..23748373 495..728 100 -> Plus
3L 23748424..23748716 729..1021 97 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:08:02 Download gff for UFO07685.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 23739347..23739644 9..306 100 -> Plus
arm_3L 23740973..23741160 307..494 100 -> Plus
arm_3L 23741240..23741473 495..728 100 -> Plus
arm_3L 23741524..23741816 729..1021 97 -> Plus