UFO07685.5prime Sequence
1126 bp (1011 high quality bases) assembled on 2011-07-08
> UFO07685.5prime
CAGTCGACATGAAAATTCTTTCAAAAAAACGTCTCCTGCGTCAAGCTGGT
CTTATGCGGCGAGGACCTCGGAAAGCAACATCACCTCTAGATCGAGTTTA
CAGAGAAATAGCAGTTTTAAAGAAACTTGATCATCCAAACGTCGTAAAGT
TGGTAGAAGTGCTGGATGACCCACTTGAAGATTCATTATATATGGTTTTT
GAATTGGTAAAACAAGGTGAAGTTCTTAGGATTCCAACAGATAATCCCTT
GTCTGAAAAAAGGGCTTGGAGTATATTTCGGGAGTCTTTACTTGGATTGG
AATATTTGCATCATCAAAAAATTATCCATGCCGACATTAAGCCTGGAAAT
TTATTATTAACTGAATTTGGACATGTAAAAATAGCTGATCTTGGCGTATG
CAATGAGTTCCTTGGAGATGATGCAACAATAAGTAATGGATCAACGGCTG
GAACTCCAGCTTTCAGGGCTCCTGAAACTCTTATCCCTGGACAGAACGAA
TATTGTGGCAGGGCGGCAGATGTCTGGGCCTTAGGCGCTACTCTATATTC
CTTAATATTCGGAAATGTGCCGTTTCTAGCTGATTCAGTACCCTTACTGT
ATGAAAAAATTAAACAAGATTCTGTCAAATTTCCAGAAAACCACAAAGTA
ACTGAAAATTTAAAAAGTTGCATAGTTCAAATGTTGGAAAAGAATCCGAC
GCAGAGAATTACTATTCCCCAGTTAAAGACTAGTAAATGGGTAACTTCTG
ATGGGGACTATCCCTTGCCGACCGAAGAAGAAAATTGTTGCTTGGGTACA
AGTAGACGACGAAGATATAGACTCCGTCGTGCGCAGCATTCCTAAATTGG
ACACACTTATATTAATTAAAACAATGTTAAAAAAGCATTCATTTGGCAAC
CCGTTTGTAAAGGATGTTCTGGAACATCATCATCGCTCGCGGGCTGCTCG
AGGATGAAAGGTCATACGCGCAGGTCGATCTAATTCAGCACCTGGTTCAT
ATCATATGGTCAACAGGCCAGACAGCCTTCGTCGGAAACTCTCTGCCATC
ACTAATGGAACATTGCTCTAGTCATGTAATGATGAACCTCATAAGTTGGA
TAGCCAGCCTTTCAGAACCATCGTTG
UFO07685.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:07:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17698-RD | 2506 | CG17698-RD | 1207..2293 | 9..1093 | 5160 | 98.7 | Plus |
CG17698-RA | 1582 | CG17698-RA | 283..1369 | 9..1093 | 5160 | 98.7 | Plus |
CG17698-RF | 2560 | CG17698-RF | 1559..2347 | 307..1093 | 3670 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:07:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 23746247..23746544 | 9..306 | 1490 | 100 | Plus |
3L | 28110227 | 3L | 23748422..23748705 | 727..1008 | 1210 | 98.2 | Plus |
3L | 28110227 | 3L | 23748138..23748373 | 493..728 | 1180 | 100 | Plus |
3L | 28110227 | 3L | 23747873..23748060 | 307..494 | 940 | 100 | Plus |
3L | 28110227 | 3L | 23748770..23748845 | 1020..1093 | 205 | 90.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:07:04 has no hits.
UFO07685.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:11 Download gff for
UFO07685.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17698-RB | 1209..2295 | 9..1093 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:08:02 Download gff for
UFO07685.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17698-RA | 283..1369 | 9..1093 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:55:52 Download gff for
UFO07685.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17698-RA | 283..1369 | 9..1093 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:55:52 Download gff for
UFO07685.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 23746247..23746544 | 9..306 | 100 | -> | Plus |
3L | 23747873..23748060 | 307..494 | 100 | -> | Plus |
3L | 23748140..23748373 | 495..728 | 100 | -> | Plus |
3L | 23748424..23748716 | 729..1021 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:08:02 Download gff for
UFO07685.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 23739347..23739644 | 9..306 | 100 | -> | Plus |
arm_3L | 23740973..23741160 | 307..494 | 100 | -> | Plus |
arm_3L | 23741240..23741473 | 495..728 | 100 | -> | Plus |
arm_3L | 23741524..23741816 | 729..1021 | 97 | -> | Plus |