UFO07686.5prime Sequence
1055 bp (880 high quality bases) assembled on 2011-07-08
> UFO07686.5prime
CAGTCGACATGAACGGGAGTCACCTTCAAACGGAGCAGTTGCTCTTTGAG
GAGAGGCCACTCCATGTGCCGCCCCTCTCGGAACTGAAAAGAGTCATACA
GGGTGCTCTGGATGAGAACTTTCGGACCGTAGATGTCAGTGTGGAAGCTT
GCCCGGATTTAAGGGACTCCCAGTTTGGCCTTGTGGAGCGTGGACTGGGC
GGAAAGGCCACTCTCCTAGAAGCAGGAGGGCCACCCTATTTGCGGCCCTT
GGTGCAGCGAGATAAGCTCTACAATCTGAAGGAGATCACTCGGCGGACCC
AAGGAGCAGGAAAGATCTTTGCAGTTGGACCGGGAGCAGGTCCGTGGCCC
ATTCGTCACTCCAATTGCGAGGGGATCTTTAATTTCTCGCTAAACGAAGA
GGATGAACTCACTCAAGTATTTTTACACGGCCACTGTGAGGGGAGCGAAT
GAGGATTGTGTTCTCGAAAGGATTCCCGAAACCGAATCTCGTGCTGCTCT
GATCCTGAACCTCTTCCTCAGCGAGGGAAAACCAGGTCAAGTGCTCCGAA
TTTCCGCAAAACAGCGCACTGGAGGGGAAAACTTTGTAGAATGCATTCGC
AAGGGTCTGGAACGGCACTACGGAGACCAGGTGGTGGGCTTGGGAGGAAT
GTTCGTGGTCAGGAGGGGATGTGTCCACCAGCACGTAATGCGAGATTTTA
GCAAGACGCCCATCCACACACAGGAACAGATCCAAAACTGGTTGAAGTTC
TACGAATGCCCGCCCAGCTAAACGCAGTGGGCACCTTGGTGACCAAGGAC
ATGGGACTGGACCTCCGCCTGCAGCACTTCCACTCGTTTTCCTTTGCAAA
CTGGGGAGGCCACTATCACTACGACACACGCGACTGTGAGTACGAGCTAT
CTGACGTGCGAGATGATCGGTGACGACCGTGCGACGATCAGTGCAGATGC
AGCTTCTAGACATCGTGCCGCGGCAGTAATGCTATCTATCTATCTATCTA
TCACTAGCTAGGATCTGGCTGACAGCTGATCCCATAAAGGCCGGCACAGT
CGACA
UFO07686.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:07:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32335-RB | 1082 | CG32335-RB | 70..974 | 8..904 | 4250 | 98.5 | Plus |
| CG9119-RA | 1212 | CG9119-RA | 178..1025 | 30..877 | 880 | 74.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:07:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1202014..1202799 | 877..92 | 3775 | 99.2 | Minus |
| 3L | 28110227 | 3L | 1203503..1204247 | 877..133 | 795 | 74.4 | Minus |
| 3L | 28110227 | 3L | 1202882..1202967 | 93..8 | 430 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:07:09 has no hits.
UFO07686.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:11 Download gff for
UFO07686.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32335-RB | 64..942 | 8..889 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:08:04 Download gff for
UFO07686.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32335-RB | 70..948 | 8..889 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:55:54 Download gff for
UFO07686.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32335-RB | 70..948 | 8..889 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:55:54 Download gff for
UFO07686.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1202882..1202967 | 8..93 | 100 | | Minus |
| 3L | 1202014..1202797 | 94..877 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:08:04 Download gff for
UFO07686.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1202014..1202797 | 94..877 | 99 | <- | Minus |
| arm_3L | 1202882..1202967 | 8..93 | 100 | | Minus |
