Clone UFO07692 Report

Search the DGRC for UFO07692

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:76
Well:92
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptTsp26A-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO07692.5prime Sequence

1147 bp (999 high quality bases) assembled on 2011-07-08

> UFO07692.5prime
CAGTCGACATGCCAGCTGCTGTGCGCAAGTTCCGCCGCGAGACCAGTGAA
ATCAGCTGCTGTCTGAAGTACCTTTTGTTCGCCAGCAATGTGATCCTGTG
GCTCTCGGCCCTGCTGGTCCTCTCCGTTGGCATCTGGGCCTGGAGCGAGA
AGGGCATGTTCCGCAACATTGCGCGGCTGCACTTCATCGCCCTGGACCCG
GCCTTCGTCCTGATCATCCTGGGAGGCGTCACCTTCCTACTGGGCTTCAT
GGGCAGCGTGGGCGCCTTGCGCGAGAACACCTGCCTCCTGGGGGCGTACG
CCATCTTCTTGAGTGTCTTGCTTATCGCAGAGATCGGCTTCTGTGCCGTG
GCCTTCGTGCTCAAGGACAAGGGCTGGATCAAAGACCAGGCCACCGAGGG
ACTCAAGGCCTTCATTCGCCATTATCGCGAGGACGCAGACCAGCAGAATC
TCATTGATTGGATCCAGGAGGATTGGTTGCAGTGTTGCGGCATTGATGGT
CCCAAGGACTGGGACAGCAACAACTACTTCAATTGCTCGTCTATCGCTAT
TGGCAGCAGGGAGGCGTGCGGAGTGCCATTCTCCTGCTGCCGCAGACGTC
CGCAGGAGGTGATCAAGAACAAGCAATGCGGCTACGATGTACGCAAGGAG
GGATATCCGGTGGATAGGAATATACATGAGCGTGGCTGCTTGCGCGCTGG
CGAGGATTGGCTGGAGGCCCATCTGATTAGTGTGGCGATTGGCTGCGTGG
CTCTGCTCGTCCTGCAGGGCATGGAGTTGTCCAAAATAATCTACGAAAAG
GGCTGTGTTCAAGCAGGCGAAGAATGGATGGAGCACAACTTGATTATTAT
TTCCGCAACTGTTATAGTTGTGATGTTTTTTCAGATCTTGGGCATTTGCT
TTGCTCAGAACCTGCGTGCCGATATCTACACTCAAAAGTCAAATGCCCAG
TTCAACATCGTGCGCGGCAGTATGTTATTATAATCTATTATCCATAGCAG
ATCTGTAGAAGTGATCACAAAAGCGCACACTCGCATCATGATCAGCTACG
ACTACGATCAGACGACATGCCCTGCTTCACTGATTACTCCATGACTCACG
TGACGACCGACTGCTGATCCGAACGCATCTGCTAAGACGTGGAATCA

UFO07692.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:07:29
Subject Length Description Subject Range Query Range Score Percent Strand
Tsp26A-RB 3030 CG9093-RB 85..1019 9..943 4660 99.9 Plus
Tsp26A-RD 2913 CG9093-RD 85..843 9..767 3780 99.9 Plus
Tsp26A-RC 2919 CG9093-RC 85..732 9..656 3225 99.8 Plus
Tsp26A-RD 2913 CG9093-RD 841..902 882..943 310 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:07:26
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6000312..6000599 9..296 1440 100 Plus
2L 23513712 2L 6000804..6001083 377..656 1385 99.6 Plus
2L 23513712 2L 6001474..6001593 765..884 600 100 Plus
2L 23513712 2L 6001159..6001270 657..768 560 100 Plus
2L 23513712 2L 6000663..6000744 296..377 410 100 Plus
2L 23513712 2L 6001660..6001727 876..943 310 97.1 Plus
Blast to na_te.dros performed on 2014-11-27 00:07:27 has no hits.

UFO07692.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:14 Download gff for UFO07692.5prime
Subject Subject Range Query Range Percent Splice Strand
Tsp26A-RB 77..1016 1..943 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:08:12 Download gff for UFO07692.5prime
Subject Subject Range Query Range Percent Splice Strand
Tsp26A-RB 80..1019 1..943 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:56:02 Download gff for UFO07692.5prime
Subject Subject Range Query Range Percent Splice Strand
Tsp26A-RB 80..1019 1..943 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:56:02 Download gff for UFO07692.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 6000805..6001083 378..656 99 -> Plus
2L 6001159..6001269 657..767 100 -> Plus
2L 6001477..6001593 768..884 100 -> Plus
2L 6000307..6000599 1..296 98 -> Plus
2L 6000664..6000744 297..377 100 -> Plus
2L 6001669..6001727 885..943 100 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:08:12 Download gff for UFO07692.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6001669..6001727 885..943 100 == Plus
arm_2L 6000307..6000599 1..296 98 -> Plus
arm_2L 6000664..6000744 297..377 100 -> Plus
arm_2L 6000805..6001083 378..656 99 -> Plus
arm_2L 6001159..6001269 657..767 100 -> Plus
arm_2L 6001477..6001593 768..884 100 -> Plus