UFO07692.5prime Sequence
1147 bp (999 high quality bases) assembled on 2011-07-08
> UFO07692.5prime
CAGTCGACATGCCAGCTGCTGTGCGCAAGTTCCGCCGCGAGACCAGTGAA
ATCAGCTGCTGTCTGAAGTACCTTTTGTTCGCCAGCAATGTGATCCTGTG
GCTCTCGGCCCTGCTGGTCCTCTCCGTTGGCATCTGGGCCTGGAGCGAGA
AGGGCATGTTCCGCAACATTGCGCGGCTGCACTTCATCGCCCTGGACCCG
GCCTTCGTCCTGATCATCCTGGGAGGCGTCACCTTCCTACTGGGCTTCAT
GGGCAGCGTGGGCGCCTTGCGCGAGAACACCTGCCTCCTGGGGGCGTACG
CCATCTTCTTGAGTGTCTTGCTTATCGCAGAGATCGGCTTCTGTGCCGTG
GCCTTCGTGCTCAAGGACAAGGGCTGGATCAAAGACCAGGCCACCGAGGG
ACTCAAGGCCTTCATTCGCCATTATCGCGAGGACGCAGACCAGCAGAATC
TCATTGATTGGATCCAGGAGGATTGGTTGCAGTGTTGCGGCATTGATGGT
CCCAAGGACTGGGACAGCAACAACTACTTCAATTGCTCGTCTATCGCTAT
TGGCAGCAGGGAGGCGTGCGGAGTGCCATTCTCCTGCTGCCGCAGACGTC
CGCAGGAGGTGATCAAGAACAAGCAATGCGGCTACGATGTACGCAAGGAG
GGATATCCGGTGGATAGGAATATACATGAGCGTGGCTGCTTGCGCGCTGG
CGAGGATTGGCTGGAGGCCCATCTGATTAGTGTGGCGATTGGCTGCGTGG
CTCTGCTCGTCCTGCAGGGCATGGAGTTGTCCAAAATAATCTACGAAAAG
GGCTGTGTTCAAGCAGGCGAAGAATGGATGGAGCACAACTTGATTATTAT
TTCCGCAACTGTTATAGTTGTGATGTTTTTTCAGATCTTGGGCATTTGCT
TTGCTCAGAACCTGCGTGCCGATATCTACACTCAAAAGTCAAATGCCCAG
TTCAACATCGTGCGCGGCAGTATGTTATTATAATCTATTATCCATAGCAG
ATCTGTAGAAGTGATCACAAAAGCGCACACTCGCATCATGATCAGCTACG
ACTACGATCAGACGACATGCCCTGCTTCACTGATTACTCCATGACTCACG
TGACGACCGACTGCTGATCCGAACGCATCTGCTAAGACGTGGAATCA
UFO07692.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:07:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tsp26A-RB | 3030 | CG9093-RB | 85..1019 | 9..943 | 4660 | 99.9 | Plus |
Tsp26A-RD | 2913 | CG9093-RD | 85..843 | 9..767 | 3780 | 99.9 | Plus |
Tsp26A-RC | 2919 | CG9093-RC | 85..732 | 9..656 | 3225 | 99.8 | Plus |
Tsp26A-RD | 2913 | CG9093-RD | 841..902 | 882..943 | 310 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:07:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6000312..6000599 | 9..296 | 1440 | 100 | Plus |
2L | 23513712 | 2L | 6000804..6001083 | 377..656 | 1385 | 99.6 | Plus |
2L | 23513712 | 2L | 6001474..6001593 | 765..884 | 600 | 100 | Plus |
2L | 23513712 | 2L | 6001159..6001270 | 657..768 | 560 | 100 | Plus |
2L | 23513712 | 2L | 6000663..6000744 | 296..377 | 410 | 100 | Plus |
2L | 23513712 | 2L | 6001660..6001727 | 876..943 | 310 | 97.1 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:07:27 has no hits.
UFO07692.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:14 Download gff for
UFO07692.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tsp26A-RB | 77..1016 | 1..943 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:08:12 Download gff for
UFO07692.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tsp26A-RB | 80..1019 | 1..943 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:56:02 Download gff for
UFO07692.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tsp26A-RB | 80..1019 | 1..943 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:56:02 Download gff for
UFO07692.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6000805..6001083 | 378..656 | 99 | -> | Plus |
2L | 6001159..6001269 | 657..767 | 100 | -> | Plus |
2L | 6001477..6001593 | 768..884 | 100 | -> | Plus |
2L | 6000307..6000599 | 1..296 | 98 | -> | Plus |
2L | 6000664..6000744 | 297..377 | 100 | -> | Plus |
2L | 6001669..6001727 | 885..943 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:08:12 Download gff for
UFO07692.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6001669..6001727 | 885..943 | 100 | == | Plus |
arm_2L | 6000307..6000599 | 1..296 | 98 | -> | Plus |
arm_2L | 6000664..6000744 | 297..377 | 100 | -> | Plus |
arm_2L | 6000805..6001083 | 378..656 | 99 | -> | Plus |
arm_2L | 6001159..6001269 | 657..767 | 100 | -> | Plus |
arm_2L | 6001477..6001593 | 768..884 | 100 | -> | Plus |