UFO07695.5prime Sequence
1135 bp (1021 high quality bases) assembled on 2011-07-08
> UFO07695.5prime
CAGTCGACATGGTCGCTCAGTGGAAAATCATCAACGAGAACTACAAAAAT
CTGGAGGGCTACAAGCGTGTGGCCTGGCCACCGGCCTCCGAGGAGCGGAT
CATCCGGGAGTTCACCCCCCAGCCGCAGACTCAGAGTCCGGCTCCCGGTG
CCGGAGGCTACTATCCGCAGGCCCACGCTCCCACAGCAGCAGCTGCCGCT
CCACCTCAGCCCCAGTTGCCCTACTCGCAGGATCAGACTGATCTGCAGCA
GCAGCAACAACAGCAGCAGCAGCAGTATCCGGGAGCCTACGCTGGCCAGG
ATAGCTACCGGGGCGCCAGTCCCGGCATCATCACCCTGCGCAAGGAGGCT
CCAGTCAGCCAGAAGCCTGCACCAGTCTACACTTCGCAGCCAGCCGCCGT
CAGTTATCAGGGAGGCAGCTAATTGCGCGGAGATTTGAAATGGCCACCAC
CGGAGTACAAGGAGGCCGCGGCTCGCGAGAACGAGGAACGACGCCAGTTG
GCGTTGGGTCCCGTCTGCCGTCCCAGGAGAGTTAACCGGGACTACACACC
CTTCTTTGCCAAGCACCAGTTGAACAATGGCTATCCCAGCTACAAGGTGC
CTCCGGGCACCCAGCACATTTTCGGCGCAAGCTTTCTAGACCATTCGTTT
GGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCA
TAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCT
CACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGA
TGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCT
CGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAAT
TCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAAC
CTGATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATATATTTGCCC
ATGGTGAAAACGGGGGCGAAGAGTTGTCCATATTGGCACGTTTAATCAAA
CTGGGTGAAACTCACCCAAGGATGCCTGAAAACGAAAAAATATTCTCAAA
CCTTTAAGGAATAAGGGCCCAGGTTTCTCCACCGC
UFO07695.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:07:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43897-RI | 2548 | CG43897-RI | 599..1217 | 8..626 | 3080 | 99.8 | Plus |
| CG43897-RR | 3268 | CG43897-RR | 1518..1937 | 207..626 | 2085 | 99.8 | Plus |
| CG43897-RQ | 2827 | CG43897-RQ | 1077..1496 | 207..626 | 2085 | 99.8 | Plus |
| CG43897-RR | 3268 | CG43897-RR | 599..800 | 8..209 | 1010 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:07:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9832475..9832680 | 207..412 | 1030 | 100 | Plus |
| 3L | 28110227 | 3L | 9830633..9830785 | 57..209 | 765 | 100 | Plus |
| 3L | 28110227 | 3L | 9832738..9832867 | 411..540 | 635 | 99.2 | Plus |
| 3L | 28110227 | 3L | 9832927..9833014 | 539..626 | 440 | 100 | Plus |
| 3L | 28110227 | 3L | 9830020..9830070 | 8..58 | 255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:07:42 has no hits.
UFO07695.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:16 Download gff for
UFO07695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33205-RI | 599..1224 | 8..635 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:08:19 Download gff for
UFO07695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43897-RI | 599..1224 | 8..635 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:56:09 Download gff for
UFO07695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43897-RI | 599..1224 | 8..635 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:56:09 Download gff for
UFO07695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9830020..9830069 | 8..57 | 100 | -> | Plus |
| 3L | 9830634..9830785 | 58..209 | 100 | -> | Plus |
| 3L | 9832478..9832679 | 210..411 | 100 | -> | Plus |
| 3L | 9832739..9832866 | 412..539 | 99 | -> | Plus |
| 3L | 9832928..9833021 | 540..635 | 96 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:08:19 Download gff for
UFO07695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9823120..9823169 | 8..57 | 100 | -> | Plus |
| arm_3L | 9823734..9823885 | 58..209 | 100 | -> | Plus |
| arm_3L | 9825578..9825779 | 210..411 | 100 | -> | Plus |
| arm_3L | 9825839..9825966 | 412..539 | 99 | -> | Plus |
| arm_3L | 9826028..9826121 | 540..635 | 96 | == | Plus |
