UFO07702.5prime Sequence
1143 bp (1025 high quality bases) assembled on 2011-07-14
> UFO07702.5prime
CAGTCGACATGACGCAGACCAAGCAGCCAGCAGGGCGGTCGTCCACCTCG
GCCGGGGATTTTGTAGCCCCCATTAGCTCTACGAGTGCCTCCAAGTTCAC
GCCCTGCTCCGCCTCCGACCACAATGTCCTGCTGAACAACTTCCAGCTTA
AGAAGAAGAGCTACAGGGTCCTGCTTCACGGACAGCAGTTGGTTTGGGAG
CGTCTGCAGAAGATCAAGCAATCGCCCCAAGGAAACGAGGCCAAGGCACC
GTTGCCGCCGGACTCGCCAGCTCAACCAGGCGGAATCTGCTCTTATGGAC
CACAAAGCCACGTGCTCCACCTGGACGATGTGGTTAGCATAAGGAGCGGG
GACACCAAGGCGAGCTCCCTCAAACCGCCTTCGCCGCCAGGCTCGGAACG
CAGTTCCGGATGCAGTGGCGATGTTGCTCAAGGGAAGCCTACCAGTCAAT
ACCTGACCATCAACTATGCCATGAGGCTGAGCAAGTCCCAAACGGATTGC
AATCGGTGGGAGCTAAGGAGACTCACCTTCTTCAACTCGGATCCCTACAT
AGTGAGGCAGTGGGACCAGGAGCTGCAAATCCGTCTGCATAGCTCCTCCC
CCACCCGGATGCGAGTGCGCCGCCTTTTGGTCTTTATAAACCCCTATGGA
GGTCGCAAGGCGGGAGCTCAGACCTATGAGCGCCATGTGAGACCTATTTT
CCAGCTTGCCGGCGTAGACGCCACGTGTATCACCACTCAGAGGGCAAACC
AAGTGAAGGACATACTTCTGAGCCATGATCTGGGAGTATACGATGCGGTT
TGCTGTGTCGGAGGCGATGGCACCGTAGCAGAGGTCATCAACGGACTGAT
ATTCCGTCAAATGCGAGAGTTGGGACTGGACGAACAGCGGCCACCATACA
TTCCAAGACCGGCTCTGCCAGTGGGTGTGATTCCCGCTGGCAGCACGACA
CATTGCGTATAGTATGCACGGCACGGCGGATGTGAGACAGCGGCTATCCA
TGTGATTCTGGGCCAGCATCGGGGATTGATGGTGTGCAGTGTGAGCAATG
GCAGTCCCTGCCTCGAATTCTGTGCCAGTGTTCTGGAGCTACGGGTACCT
TGGGCGAGGTGGCGAGCCCTAGCGAAACTACGCTGAATGGTAA
UFO07702.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:20:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cerk-RB | 2435 | CG16708-RB | 79..1221 | 1..1140 | 5295 | 98.2 | Plus |
| Cerk-RA | 2786 | CG16708-RA | 430..1572 | 1..1140 | 5295 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:20:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5360616..5361717 | 1100..1 | 5100 | 98.7 | Minus |
Blast to na_te.dros performed 2014-11-27 00:20:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dpse\mini-me | 4622 | Dpse\mini-me DPSEMINIME 4622bp | 1589..1612 | 234..211 | 111 | 95.8 | Minus |
UFO07702.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:21:07 Download gff for
UFO07702.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cerk-RB | 79..1204 | 1..1125 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:14:11 Download gff for
UFO07702.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cerk-RA | 430..1555 | 1..1125 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:00:55 Download gff for
UFO07702.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cerk-RA | 430..1555 | 1..1125 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:00:55 Download gff for
UFO07702.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5360572..5361717 | 1..1143 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:14:11 Download gff for
UFO07702.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1186294..1187439 | 1..1143 | 98 | | Minus |
