UFO07706.5prime Sequence
1155 bp (1051 high quality bases) assembled on 2011-07-14
> UFO07706.5prime
CAGTCGACATGGTGCCCCACAGCAACGAGGATGCCATGAACAAGATACCC
CTGAAGTCCGCCGGCGGATTGGACTCCGACGAGGAGAAGAATGGCGGCGA
ACTCATGCAGGACACTGCCGCCGCCGAGGAGGCGCGTCGCGAACAGATGC
GCGTGAAAGTTTTGGCCTGGATGAAGAAGCTAACCATCGTGCTAATCTGC
TTTATCGGCATTGCCCTGATCAGCTACGTGATAATTAGCCTGTGTTTCAG
TGACTGGCCTAAATCGACGCCAAATAGAAACAACACAACAACCGCAACAA
CAACGACAGCAACACCAACAACAATAAGCACAGAGGCAACCATAACAACA
ATTGCACCATCAGGATTAGCAACAACAATAAGCACCAGCACAACAACAAT
AGCAACAAGTGCAACACAACAACCACCAACAGCAACAACAACAACAACAG
CAACCAGAACAACAACCACTAGCAGAACAGATAGCAATCCCAGCCCCACA
CCTAAAACATTTCATTTAACAGATGATGAGCAGCAACAGGAACCGGAAAC
GGAAACGGACAACATTGGCAATCTCAATCTGGGAATCACGAGCACAGCGA
CCACGCCATCGGACGACGTCTTGCCCAATGTGGCCGCCTCCACGGCGGCA
ACGACAGCGGCACCACCCACCTGGCTAGCGGATCAGATCAAGATCGATAC
CAGCGAACAGTACAACTCGATCCTGGGGGGTCTACCAACATGGAGCCGTG
AGTTCCGATAACCTTGAGTGCAGCAAGATCGGCAGCGGCATCCTGCAGAA
GAATGGCAGCGCGGTGGACGCAGCGATCGCCGCCCTTCTGTGCAACGGAC
TGCTGACCCTGCAGAGCATGGGCATCGGTGGTGGTCACCTGATGAACGTC
TATAACCGAAAGGAGCGCCACGCCACCGCCATCGATGCCCGCGAGGTGGC
GCCCTACGAGGCCACCGGAGGACATGTTTGCCCAGCAGCCGGAGAATTCC
GACAGGGACCGCTGAGCATCGCTGTGCCGGCGAAGGTGATGGGCCTACCA
TGTGCGCATCAAAAGTCGGAACAGCCTGCCGGTGGCGGAACTGGGTGGCG
CCCATCGCTTGGAGCTCTGCGAAGATACATGGTGTCGCCAGCACCATGGA
ACGGG
UFO07706.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:21:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4829-RC | 2892 | CG4829-RC | 203..1346 | 9..1155 | 5215 | 97.8 | Plus |
| CG4829-RA | 3022 | CG4829-RA | 333..1476 | 9..1155 | 5215 | 97.8 | Plus |
| CG4829-RB | 3129 | CG4829-RB | 440..1583 | 9..1155 | 5215 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:21:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16823586..16824118 | 252..785 | 2620 | 99.8 | Plus |
| X | 23542271 | X | 16824357..16824666 | 784..1094 | 1165 | 95.2 | Plus |
| X | 23542271 | X | 16822633..16822773 | 9..149 | 690 | 99.3 | Plus |
| X | 23542271 | X | 16823103..16823206 | 149..252 | 520 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:21:02 has no hits.
UFO07706.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:21:09 Download gff for
UFO07706.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4829-RC | 193..1217 | 1..1028 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:14:22 Download gff for
UFO07706.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4829-RB | 434..1458 | 1..1028 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:01:03 Download gff for
UFO07706.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4829-RB | 434..1458 | 1..1028 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:01:03 Download gff for
UFO07706.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16822627..16822772 | 1..148 | 96 | -> | Plus |
| X | 16823103..16823206 | 149..252 | 100 | -> | Plus |
| X | 16823587..16824118 | 253..785 | 99 | -> | Plus |
| X | 16824359..16824646 | 786..1074 | 96 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:14:22 Download gff for
UFO07706.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16716660..16716805 | 1..148 | 96 | -> | Plus |
| arm_X | 16717136..16717239 | 149..252 | 100 | -> | Plus |
| arm_X | 16717620..16718151 | 253..785 | 99 | -> | Plus |
| arm_X | 16718392..16718679 | 786..1074 | 96 | -> | Plus |
