UFO07711.5prime Sequence
1118 bp (1025 high quality bases) assembled on 2011-07-14
> UFO07711.5prime
CAGTCGACATGGCGGATGGTGGGCATTCATTCGTGAAGAAGACATTTCAT
AAGCCAACATACTGTCACCACTGCTCGGATCTGCTCTGGGGCCTCATCCA
GCAGGGATATATCTGCGAAGTTTGCAACTTTATCATTCACGAACGATGTG
TCAGCAGCGTGGTAACGCCCTGTTCCGGCATCGCTCCATGTATTATAAAG
AATCCCGTTGCCCATTGTTGGTCCGAGCCAACTCATCACAAGAGAAAATT
CTGCACAGTTTGCCGTAAGCGATTGGATGAAACGCCAGCGGTGCATTGTT
TAGTCTGCGAATATTTCGCGCATATTGAGTGCCAAGATTTTGCCGTGCCC
GATTGCACCGAGAATGCCACGTATGTGCCAGGCAAGGAGCTGCTTAATGT
GAAGCATCAGCATCACTGGCGAGAGGGCAATCTTCCATCAACGTCCAAAT
GCGCTTACTGCAAGAAAACCTGTTGGTCCTCGGAATGTCTCACTGGCTAT
CGTTGCGAGTGGTGTGGCATGACGACCCATGCCGGATGTCGCATGTACCT
GCCAACCGAATGTAATTTTGGTATTCTACAACCTATCTACTTACCTCCGC
ACTCAGTCTCGATTCCGCGCACCGAGGTGCCCATCGAGGCCATCATCGGC
GTCCAGGTCAAATCGAAGACTTCGCTCGTGCGCGACTACTCGTGTCGTAA
GTACAGAGTCCTGATCCGGCAGGATATGCTGGCATTTCAGATTTATCTGG
CCCTATCAAAACCAAAATCCGCAAGCTTTCTAGACCATTCGTTTGGCCGC
GCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATC
ACACCTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCA
ATAAAAAACGCCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGA
GTTTCTGAGGTCATTACTGAATTTTATCAACAAGGAGTTCCAAGCGAGCT
CGAATATCGATTTACCGCCCCCGCCCTGCCACTTCATCGCAAGTACTTGT
TGTGTTCATTAAGCATTTCTGCCGAACTTGAAGCCAATTCACAAACCCGT
CATGTAATGAACCTGAAT
UFO07711.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:21:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31140-RE | 1811 | CG31140-RE | 836..1597 | 9..770 | 3810 | 100 | Plus |
| CG31140-RG | 6647 | CG31140-RG | 824..1511 | 9..696 | 3440 | 100 | Plus |
| CG31140-RF | 4144 | CG31140-RF | 846..1533 | 9..696 | 3440 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:21:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23973353..23973628 | 495..770 | 1380 | 100 | Plus |
| 3R | 32079331 | 3R | 23966591..23966702 | 9..120 | 560 | 100 | Plus |
| 3R | 32079331 | 3R | 23973033..23973141 | 302..410 | 545 | 100 | Plus |
| 3R | 32079331 | 3R | 23972607..23972711 | 199..303 | 525 | 100 | Plus |
| 3R | 32079331 | 3R | 23973205..23973293 | 408..496 | 445 | 100 | Plus |
| 3R | 32079331 | 3R | 23972446..23972527 | 119..200 | 410 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:21:15 has no hits.
UFO07711.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:21:11 Download gff for
UFO07711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31140-RE | 828..1600 | 1..774 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:14:27 Download gff for
UFO07711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31140-RE | 828..1600 | 1..774 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:01:09 Download gff for
UFO07711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31140-RE | 828..1600 | 1..774 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:01:09 Download gff for
UFO07711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23966583..23966702 | 1..120 | 96 | -> | Plus |
| 3R | 23972448..23972527 | 121..200 | 100 | -> | Plus |
| 3R | 23972609..23972711 | 201..303 | 100 | -> | Plus |
| 3R | 23973035..23973141 | 304..410 | 100 | -> | Plus |
| 3R | 23973208..23973292 | 411..495 | 100 | -> | Plus |
| 3R | 23973354..23973631 | 496..774 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:14:27 Download gff for
UFO07711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19798331..19798433 | 201..303 | 100 | -> | Plus |
| arm_3R | 19798757..19798863 | 304..410 | 100 | -> | Plus |
| arm_3R | 19798930..19799014 | 411..495 | 100 | -> | Plus |
| arm_3R | 19792305..19792424 | 1..120 | 96 | -> | Plus |
| arm_3R | 19798170..19798249 | 121..200 | 100 | -> | Plus |
| arm_3R | 19799076..19799353 | 496..774 | 99 | == | Plus |
