UFO07715.5prime Sequence
1083 bp (999 high quality bases) assembled on 2011-07-14
> UFO07715.5prime
CAGTCGACATGGCCCTGTATCCATCCTCGTCGCGACCGCGGACGCTCATG
GAGCAGCTGCTGGCACGCAAGATTGAGGCTGCTGCCGCAGCGGGCGGCGC
TCCCTCCGCCGCTACCGCAACTCCTACCGCTTCCGGCTCGGCCACGCCCA
CGCCCTCGCCAACATCACCCAATCCGCCAGCGGTCGGCGGCATGGGACTG
CCCATGCCACTGACCCTGGGCCTGGGCTTGGGCCTGGGCATGGGCATGGG
CGTGGTTAGCCGCCTGCGACGCACCGACTCCTTGGACTCCACCAGCAGCC
TGGGTTCGCTGGCCTTCGGCGAGGATGTGTGCCGCTGCGACGACTGCCTT
CTGGGCATCGTCGATCTCTACGTGATTAGTGCCGCCGAGGCGGCGAAGAA
GAAGAGCTCCGGCTGGCGAAAGATTCGCAACATCGTTCAGTGGACGCCCT
TCTTTCAGACGTACAAGAAGCAGCGCTATCCATGGGTTCAACTGGCCGGA
CACCAGGGCAACTTCAAGGCAGGTCCCGAACCGGGCACCGTGCTCAAGAA
GCTCTGTCCCAAGGAGGAGGAGTGCTTCCAGATTCTCATGCACGATCTGC
TTAGGCCCTATGTGCCCGTTTACAAGGGTCAGGTGACCAGCGAGGATGGC
GAACTTTACCTGCAGCTGCAGGATCTGCTCAGTGACTATGTGCAGCCATG
CGTCATGGACTGCAAGGTGGGTGTGCGCACCTATCTGGAGGAGGAGACTG
TCCAAGGCCAAGGAGAAGCCCAAGCTGCGCAAGGATATGTACGACAAGAT
GATCCAAATCGACAGCCACGCTCCCACCGCCGAGGAGCACGCAGCCAAAG
CGGTGACAAGCCACGATACATGGTCTGGCGTGAGACCATCTCCAGCACGG
CACGCTGGGATTCCGCATCGAGGGCATCAGAAACGATGGCACATTTCAAA
GATTTCAAACGACGAGTCACGCGAACAAATCAAGTTGCCTTTCTCGAGTT
CCTCAGCGGCACCCCATATTTGACCCGCTACATACCACGCTTTGCGAAGC
CTTAAGGCACCCTTGCGTCTCGAATTCTTCAGA
UFO07715.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:22:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| IP3K2-RH | 2355 | CG45017-RH | 411..1499 | 6..1080 | 4865 | 97.5 | Plus |
| IP3K2-RC | 2554 | CG45017-RC | 610..1698 | 6..1080 | 4865 | 97.5 | Plus |
| IP3K2-RD | 2222 | CG45017-RD | 512..1600 | 6..1080 | 4865 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:22:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13318649..13319047 | 6..404 | 1995 | 100 | Plus |
| X | 23542271 | X | 13327346..13327597 | 403..654 | 1260 | 100 | Plus |
| X | 23542271 | X | 13327666..13327935 | 655..923 | 1175 | 98.2 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:22:35 has no hits.
UFO07715.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:21:25 Download gff for
UFO07715.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IP3K2-RC | 1..1059 | 9..1057 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:15:14 Download gff for
UFO07715.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IP3K2-RD | 485..1552 | 1..1057 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:01:49 Download gff for
UFO07715.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IP3K2-RD | 506..1573 | 1..1057 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:01:49 Download gff for
UFO07715.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13318643..13319047 | 1..404 | 99 | -> | Plus |
| X | 13327348..13327597 | 405..654 | 100 | -> | Plus |
| X | 13327666..13327934 | 655..922 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:15:14 Download gff for
UFO07715.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13212676..13213080 | 1..404 | 99 | -> | Plus |
| arm_X | 13221381..13221630 | 405..654 | 100 | -> | Plus |
| arm_X | 13221699..13221967 | 655..922 | 98 | -> | Plus |
