UFO07721.5prime Sequence
1156 bp (1015 high quality bases) assembled on 2011-07-14
> UFO07721.5prime
CAGTCGACATGACCAATTCGGGACGCAATCATCATCGATTCGATCAAACA
TTCCTAGGCGCCACCGAACTGGACGATGAGTTAATCAAACAACTGCCAAA
GGAGGTACTGCTGCGCGTCTTCTCCTACCTGGATGTTGTCTCACTATGCC
GCTGTGCACAGGTATGCAAATATTGGAACGTGCTGGCCCTCGACGGTTCC
AGCTGGCAGAAAATCAATCTATTCGACTTTCAACGTGATATCGAGGGTCC
AGTGATTGAGAATATATCGCAGCGATGTCGCGGTTTTCTCAAGTCACTGT
CGCTGCGTGGCTGCCAATCGGTGGGAGATCAGTCCGTGAGAACTCTAGCG
AACCACTGCCACAATATCGAGCACTTAGATCTGTCGGATTGCAAGAAGAT
AACCGATATATCCACACAGTCCATCAGCAGGTATTGCTCCAAGCTAACGG
CCATTAATTTGCACTCGTGCTCCAACATAACAGACAACAGCTTGAAGTAC
TTATCCGATGGCTGTCCAAATCTCATGGAGATCAACGTGTCCTGGTGCCA
CCTGATCTCCGAGAATGGTGTGGAGGCGCTGGCTCGTGGCTGCGTCAAGC
TGCGCAAATTCAGCAGTAAAGGTTGTAAACAAATAAACGACAATGCCATA
ATGTGCCTGGCCAAATACTGTCCCGATTTAATGGTGCTAAATCTACACAG
CTGCGAGACCATAACCGATTCATCGATTCGCCAACTGGCCGCCAATTGCC
ACAAGCTGCAGAAGTTGTGCGTGTCCAAGTGCGCGGACCTCACCGATCTC
ACTCTGTTGTCCCTCTCGCAGCACAATCATCTACTGAACACCCTGAGGTA
TCCGGGTGTCGCAACTTCACGGACATTGGCTTCCAGGCGCTGGGGCGAAA
CTGCAAGTATCTGGAGCGAATGGACCTGGAAGGAGTGCAGCCAGATTACA
GACCTAACGTTGGCTCATCTTGCCACTGGCCTGTTCCAGCTTAAAGAAAT
TGACCCTATCCGCACTTGTGAGCTTGATTTACGACGAATGGTTATTCGAC
ACCCCTCCCCCCCTGGCAGCTGTGGCTGGCCGAAATTCTGTTCGTGCTGG
AGAACTAGAAAAACTGCCCCCCTGATAAACGCAACCGGAAGGCTTGAAAG
ACATTT
UFO07721.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:22:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9003-RG | 3693 | CG9003-RG | 668..1772 | 9..1128 | 5065 | 97.8 | Plus |
| CG9003-RF | 2885 | CG9003-RF | 651..1755 | 9..1128 | 5065 | 97.8 | Plus |
| CG9003-RE | 2885 | CG9003-RE | 651..1755 | 9..1128 | 5065 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:22:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11643633..11643928 | 1002..706 | 1310 | 98.3 | Minus |
| 2R | 25286936 | 2R | 11643991..11644179 | 707..519 | 945 | 100 | Minus |
| 2R | 25286936 | 2R | 11644239..11644418 | 518..339 | 900 | 100 | Minus |
| 2R | 25286936 | 2R | 11644845..11644964 | 164..45 | 600 | 100 | Minus |
| 2R | 25286936 | 2R | 11644485..11644581 | 340..244 | 485 | 100 | Minus |
| 2R | 25286936 | 2R | 11644680..11644769 | 246..157 | 450 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:22:57 has no hits.
UFO07721.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:21:28 Download gff for
UFO07721.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9003-RD | 666..1674 | 1..1010 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:15:32 Download gff for
UFO07721.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9003-RE | 643..1651 | 1..1010 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:01:59 Download gff for
UFO07721.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9003-RE | 643..1651 | 1..1010 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:01:59 Download gff for
UFO07721.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11644485..11644579 | 246..340 | 100 | <- | Minus |
| 2R | 11644681..11644764 | 162..245 | 100 | <- | Minus |
| 2R | 11644848..11644964 | 45..161 | 100 | <- | Minus |
| 2R | 11643633..11643926 | 708..1002 | 98 | <- | Minus |
| 2R | 11643991..11644179 | 519..707 | 100 | <- | Minus |
| 2R | 11644239..11644416 | 341..518 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:15:32 Download gff for
UFO07721.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7531138..7531431 | 708..1002 | 98 | <- | Minus |
| arm_2R | 7531496..7531684 | 519..707 | 100 | <- | Minus |
| arm_2R | 7531744..7531921 | 341..518 | 100 | <- | Minus |
| arm_2R | 7531990..7532084 | 246..340 | 100 | <- | Minus |
| arm_2R | 7532186..7532269 | 162..245 | 100 | <- | Minus |
| arm_2R | 7532353..7532469 | 45..161 | 100 | <- | Minus |
