UFO07722.5prime Sequence
1128 bp (1015 high quality bases) assembled on 2011-07-14
> UFO07722.5prime
CAGTCGACATGGCTTTGGTTTGCGCACTGACAAACGAAGTCCCCGAGACG
CCCGTGGTTTCCCCGCACTCGGGAGCCGTTTTCGAAAAGCGGGTGATTGA
GAAGTATCTGTTAGAGAATGGCTGCGATCCCATTAGCGGCAAGGAGCTGA
AGCCGGAGGAGCTGATCGAGATCAAGACGCCGGCTGTGGTGAAACCGAAA
CCGCCAAGTGCCACCAGCATTCCGGCCACTTTGAAAACGATGCAGGACGA
GTGGGACGCCCTCATGATTCACTCGTTCACACAACGCCAGCAGCTGCAAA
CGACGCGCCAGGAGTTGTCCCATGCGCTGTATCAGCACGATGCCGCCTGT
CGTGTGATTGCCCGCCTCAATAAGGAGGTGGCCGCCGCTCGCGAAGCTCT
GGCCACGTTGAAACCGCAGGCGGGCATTGCCAACGCACCCACGGCAATAC
CACAACCGGCCCTGGCCTCTGAGGCTGGCGGAGCTGCTGCCCATCCCATG
GAGCAGGCGGGCATGAGCGCCGAGGTCATACAGAAACTGCAGGACAAGGC
CACGGTGCTGACGCAGGAGCGTAAGAAGCGCGGACGCACTGTGCCCGAGG
ATCTGGTTACAACGGATCAGGTTAAGAACTTCCTTACTGTGGCATCCCAT
CCCGGCCTACACTCGGCCTCCGTTCCCGGCATTCTGGCCTTGGACATCAA
CAGTGCTGATCACAGTAAGATTCTGACCGGAGGCAACGATAAAAACGCCA
CCGTGTTCAACAAGGACACAGAGCAGATGGTGGCCATCCTGAAAGGGACA
CACCAAGAAGATCACCAAAGTCATATATCATCCTAACGAGGATACAGTCA
TAACCGGCTCGCCCGACATGAACATACGCATCTGGCACGTGCCCACTTCG
CAGACGCAGCTTCTCCTGCGCTGCCACGAAGGACCTGTTACTGGTCTTTC
GCTGCACCCCCACTGGCGACTACTTGCTTGTCCACATCATCGACAAACAC
TGGGCATTCTTCCGATTATCCGCACAGGACGCTGCCTCACAAGTATTCGA
TAACCGCCGGAAGTTCGGCTGACGACAGCGCCATTCCATTCCTGAATGTC
TGATCTTCGTACGCACCGGTGAAACTCC
UFO07722.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:21:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prp19-RA | 1757 | CG5519-RA | 134..1229 | 9..1109 | 5095 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:21:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18449749..18450825 | 1109..28 | 4745 | 98 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:21:23 has no hits.
UFO07722.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:21:13 Download gff for
UFO07722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prp19-RA | 128..1242 | 1..1121 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:14:32 Download gff for
UFO07722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prp19-RA | 129..1243 | 1..1121 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:01:13 Download gff for
UFO07722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prp19-RA | 129..1243 | 1..1121 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:01:13 Download gff for
UFO07722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18449735..18450825 | 28..1121 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:14:32 Download gff for
UFO07722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14337240..14338330 | 28..1121 | 97 | <- | Minus |
