UFO07730.5prime Sequence
1146 bp (1047 high quality bases) assembled on 2011-07-14
> UFO07730.5prime
CAGTCGACATGGCAAAAATAAAGAAAAAGGAGGCGAAAGCTAAACCTTTG
ACTCGCAAGGAGCAGAGAAAACAGAAGTCGGAGTTCAAAAAACAGAATAA
ACGACTTTATTTCGCCGGCAAAACTAACGGAACACAGCGCGTGGCGGCGG
CGGCAGAGGCGTTGGCAGCGCAGTCGCAGCTGGGCAAAAACAAGAAGAAG
AAACGGAGCAAGAAGCCCAAAATAATAAATCCAGATGAAATACCCAAGGA
GCAACTTTTGTCCGGTGAAATAGACAGCGACGATGACGAGTCCATAGATT
CGGATTTCAGCGATGCGGAGGTGGATGCTCTGCTGCCCGCAAGGGAAAAG
ATGGAAGTCTATGAACCTCTGGGAAAAAAGGTCAAGAAAACGACAGGAGG
CGCCATCCAAAGACAGGATGAAGAGGCGGTCAGGCGGAAGGAACTGCGCC
AGCAAAAGGAACTGGAGAGCAAGTCCAAGAAGCAGCGAATCAAGCAACTT
CGCATAGAGAACGAGGAGGATGATCGCGAGATCAACAAGCTGGAAAAGAA
GCTGAAGCTCAACAAATCCAAGGACAAAAACCGCTTGGTGCGGAAGATGT
TCAATGATGGCCTGGACTACCTGCTTGACTTTGTCCTGGATGACGAGGAG
GAGAAGCGGAAGTGGGAGGAGAAGCAGGAACGTAAGAAAAAGCTGAAGGA
GCAGCAAGAAAAGGAGGAGGCGGGAATGTGGAGCGATGAGGAAGAGGATA
AGGAGGACAGGGATGAGCCCATGGATAACTTCTCAGAAGATGACAGTGGC
TCTGAGGGTGAAGATGATGATGAAGACCTAACTGGAGAGGAAGACAAAGC
GAGGAGGATTCGGAGCAGAAGAGAATGCACCTAAGATTAAAGAGGACATC
TACGGACGCAAACGCGACGCCGAGGGAAACATCCTGCCTGATCCCGTGAG
CTCGAGGCCTCAGCCGCCGGTCAAAGTACATACCGCCACATCAGCGAGCT
TTGATGGCAGCCAGCGCGGGATCAAGTGAAACAAGCAGAGATACTAGCTT
CGCCCTTCTAAGCAATGCAGGGTCTGCTCATTCGTTTGTCAAAGGATCTG
CCAAGAATGCCGCCCGCCACTCAAGACTGTAAATGAAATTCCGTTT
UFO07730.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:23:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9004-RA | 2708 | CG9004-RA | 69..1184 | 9..1114 | 5205 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:23:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2373796..2374675 | 9..886 | 4300 | 99.8 | Plus |
| 3L | 28110227 | 3L | 2374729..2374937 | 887..1091 | 695 | 94.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:23:38 has no hits.
UFO07730.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:21:33 Download gff for
UFO07730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9004-RA | 69..1184 | 9..1114 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:15:57 Download gff for
UFO07730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9004-RA | 69..1184 | 9..1114 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:02:12 Download gff for
UFO07730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9004-RA | 69..1184 | 9..1114 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:02:12 Download gff for
UFO07730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2373796..2374675 | 9..886 | 99 | -> | Plus |
| 3L | 2374729..2374964 | 887..1114 | 93 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:15:57 Download gff for
UFO07730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2373796..2374675 | 9..886 | 99 | -> | Plus |
| arm_3L | 2374729..2374964 | 887..1114 | 93 | | Plus |
