UFO07740.5prime Sequence
1124 bp (1024 high quality bases) assembled on 2011-07-14
> UFO07740.5prime
CAGTCGACATGAACATGATGGACAACCGGGCGTTGGCCTACGTGGCCCAC
CAGCCCAAGTATGAGACACCGCCGGAAGAAGCGGAGCCGCCCTGCATGCG
CTTTTCGGTTAACCTGTGGAAAAACGAGATGCTGAACTGGGTGGACCTAA
TCTGCCTGTTGCCCAATGGATTCCTGCTGGAGCTCAGGGTCAATCCGGCC
AACACCATCCAGGTAATCAAGGTGGAGATGGTCAACCAGGCCAAACAGAT
GCCACTGGGCTATGTGATCAAAGAGGCCTGCGAGTACCAGGTGTACGGCA
TCTCGACCTTCAACATCGAACCTTACACCGACGAAACGAAGCGACTCAGT
GAGGTCCAGCCGTACTTCGGCATCCTCAGCCTCGGCGAGCGCACCGACAC
AACGAGCTTTAGCAGCGACTACGAGCTGACCAAGATGGTTAACGGAATGA
TCGGCACCACCTTCGATCATAATCGAACGCACGGCTCGCCCGAGATTGAC
GACTTCCGGCTGTATATGACCCAAACTTGCGACAACATCGAACTGGAGCG
CTCCGCCTACACCTGGCAGCAGAGACTGCTCTACGAGCATCCTCTGCGAC
TGGCGAACTCGACTAAAATGCCCGAGCTGATACGGGAGCGGCATCCGACC
AGAACCTTTCTCATCGTCGTAAAGAACGAGAACGACCAGAGCACGTTTAC
GTTGTCGGTGAACGAGCAGGACACTCCCTTCTCGCTCACGGAAAGCACGC
TGCAGAAGATGAATCGGTCGCAGATGAAAATGAACGACCGGACCTCCGAC
TACATACTCAAAGTGAGCGGTCGCGACGAGTACCTGCTTGGCGACTATCC
CCTGATTCAGTTCCTGTACATCCAGAGATGCTCTCGGACTCGGCGGTTCC
AAATGTGGTGTTGCAATCAGTTTACCGCCTAGAAGTCCTACATCAACCAC
ACACGGAGCAGGCCATGGTAACAAACGACCGCTGCGAAGAACGGACAAGT
CCACCTCCAACAAGTCGATCTTCCTCGCTGGTGGGACATGGCCAACTAAC
TTCAGTTGAACGCTGCACAGACAATTTCAATGGTGGAAGCTTGACAAGAG
CGCGTGCCCTCAAGGGTGGCGGTG
UFO07740.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:21:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pi3K92E-RC | 4839 | CG4141-RC | 797..1899 | 8..1115 | 5055 | 97.8 | Plus |
| Pi3K92E-RB | 4347 | CG4141-RB | 305..1407 | 8..1115 | 5055 | 97.8 | Plus |
| Pi3K92E-RA | 4420 | CG4141-RA | 378..1480 | 8..1115 | 5055 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:21:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20632462..20633523 | 1070..8 | 4735 | 98.2 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:21:44 has no hits.
UFO07740.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:21:16 Download gff for
UFO07740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pi3K92E-RB | 273..1321 | 1..1048 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:14:44 Download gff for
UFO07740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pi3K92E-RA | 370..1418 | 1..1048 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:01:22 Download gff for
UFO07740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pi3K92E-RA | 370..1418 | 1..1048 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:01:22 Download gff for
UFO07740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20632413..20633526 | 1..1124 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:14:44 Download gff for
UFO07740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16458135..16459248 | 1..1124 | 97 | | Minus |
