UFO07750.5prime Sequence
1167 bp (1052 high quality bases) assembled on 2011-07-14
> UFO07750.5prime
CAGTCGACATGACTGAGCGCGAGAACAATGTGTACAAGGCAAAGCTGGCC
GAACAGGCCGAGCGCTACGACGAAATGGTGGAGGCCATGAAGAAGGTCGC
CTCCATGGACGTAGAGCTGACCGTCGAGGAGCGAAATCTGCTGTCGGTGG
CGTACAAGAATGTGATTGGAGCACGCCGTGCCTCGTGGCGCATCATCACC
TCGATCGAACAGAAGGAGGAGAACAAGGGGGCCGAGGAGAAATTGGAGAT
GATCAAAACCTACCGCGGACAGGTGGAGAAGGAGCTGCGCGACATCTGCT
CGGATATACTGAACGTGCTCGAGAAGCATCTCATTCCATGCGCCACATCC
GGCGAAAGCAAAGTATTCTACTATAAGATGAAGGGCGACTACCATCGCTA
CCTGGCCGAATTCGCCACCGGCTCCGACCGCAAGGATGCGGCAGAGAACT
CGCTGATTGCCTACAAGGCGGCCAGCGATATTGCCATGAACGATCTGCCA
CCAACACACCCCATCCGTTTGGGCTTGGCATTGAACTTCTCGGTGTTCTA
CTATGAGATTCTCAACTCGCCGGACCGCGCTTGCCGCTTGGCGAAAGCCG
CTTTCGATGATGCCATTGCCGAGTTGGATACACTGAGCGAAGAGAGCTAC
AAAGACTCGACACTCATCATGCAGCTGCTGCGCGACAACCTCACATTATG
GACGTCCGATATGCAGGCAGAAGAAGTAGACCCCAACGCAGGTGATGGCG
AGCCCAAAGAGCAAATCCAGGATGTTGAGGATCAGGACGTGTCGGCAAGC
TTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCA
TAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCAT
GACTAGTGCTTGGATTCTCACCAATAAAAACGCCCGGCGGCAACCGAGCG
TTCTGAACAAATCCAGATGGAGTTCTGGAGGTCATTACTTGAATCTATCA
ACAGGGAGTCCAGCGAGCCTCGAAAATCAATTACGCCCCGGCCCTGGCCA
CTCATTCGCAGTACTGGTTGTAATTTCAATTAAGGCATTCTGCCCGACAT
GGAGCCATCCCACAAACGGGCATTAGATGACTGAATTCGGCAGCGGCATC
AGCCACTCTGGGTCCGC
UFO07750.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:22:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 14-3-3epsilon-RA | 1239 | CG31196-RA | 160..945 | 9..794 | 3930 | 100 | Plus |
| 14-3-3epsilon-RB | 3092 | CG31196-RB | 316..1098 | 9..794 | 3875 | 99.6 | Plus |
| 14-3-3epsilon-RD | 3360 | CG31196-RD | 316..1095 | 9..794 | 3830 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:22:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18247432..18247905 | 72..545 | 2370 | 100 | Plus |
| 3R | 32079331 | 3R | 18247970..18248151 | 542..723 | 910 | 100 | Plus |
| 3R | 32079331 | 3R | 18248212..18248285 | 721..794 | 370 | 100 | Plus |
| 3R | 32079331 | 3R | 18242846..18242909 | 9..72 | 320 | 100 | Plus |
| 2R | 25286936 | 2R | 10107470..10107576 | 603..709 | 280 | 84.1 | Plus |
| 2R | 25286936 | 2R | 10106006..10106101 | 501..596 | 210 | 81.2 | Plus |
| 2R | 25286936 | 2R | 10106354..10106449 | 501..596 | 210 | 81.2 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:22:22 has no hits.
UFO07750.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:21:23 Download gff for
UFO07750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 14-3-3epsilon-RA | 309..1107 | 1..803 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:15:06 Download gff for
UFO07750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 14-3-3epsilon-RA | 153..951 | 1..803 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:01:42 Download gff for
UFO07750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 14-3-3epsilon-RA | 153..951 | 1..803 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:01:42 Download gff for
UFO07750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18242839..18242909 | 1..72 | 94 | -> | Plus |
| 3R | 18247433..18247902 | 73..542 | 100 | -> | Plus |
| 3R | 18247971..18248151 | 543..723 | 100 | -> | Plus |
| 3R | 18248215..18248291 | 724..803 | 95 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:15:06 Download gff for
UFO07750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14068561..14068631 | 1..72 | 94 | -> | Plus |
| arm_3R | 14073155..14073624 | 73..542 | 100 | -> | Plus |
| arm_3R | 14073693..14073873 | 543..723 | 100 | -> | Plus |
| arm_3R | 14073937..14074013 | 724..803 | 95 | == | Plus |
