UFO07751.5prime Sequence
1010 bp (961 high quality bases) assembled on 2011-07-14
> UFO07751.5prime
CAGTCGACATGAAGATATGGAGGCTGTTCTCCCAGCTGATCGTTTCGCTG
GCATGTGTTTTTGGCCAGCAGCCGGATATGGATGTTGTGGGATCTTGCTC
TAGATACAAGAAGAGCGTTTTCGAGGAAAGAATCGAGTTCGGTTTCCTGT
TGCCCGGAGCTTCGATTGAGAGTCGGATCATAGACAACTGCAGGAGCTAC
ACGCCGCTCATCGTCGGTGGTCATCCGGCCCAGCCCAGGGAATTTCCGCA
TATGGCCCGCTTGGGGCGTCGCCCAGATCCGAGCAGCCGTGCCGACTGGT
TTTGTGGTGGCGTTCTGATCAGCGAGCGGTTCGTCTTAACCGCAGCTCAC
TGCCTGGAATCGGAAAGGGGAGAGGTGAATGTTGTGCGATTGGGCGAACT
CGACTTCGATTCCTTGGATGAGGTTGCGGCGCCCAGAGACTATATGGTTG
CAGGGTATATAGCCCATCCGGGCTACGAAGATCCGCAGTTCTACCATGAT
ATAGGTCTTGTCAAACTGACGGAGGCCGTGGTCTTTGACCTATATAAGCA
TCCAGCCTGTCTGCCGTTCCAGGATGAACGCTCTTCCGACTCCTTCATAG
CCGTTGGGTGGGGAAGCACTGGCCTGGCGCTGAAGCCATCCGCCCAGCTG
CTGAAGGTGAAGTTGCAGCGCTACGGAAATTGGGTGTGCAAGAAACTGCT
TACCCGGCAGGTGGAGGAGTTCCCTCGAGGATTCGATGGAAACAACCAGC
TCTGTGTTGGTTCGGAGATGGCCCAGGACACCTGTAACGGCGACTCAGAG
GACCTTTGCTATGTACCATCGGGAATATCCTGTATGTACGTAGTGTGGGA
ATCACGTCCGCCGGTTTGTCCTGTGGTCAACAGGATTACCCGGAAGTCTA
CACTCGACGTCTATCCTTATTTTAGCTGGATAGCCCGAACTTTGGCCACG
ATTGCAAGCTTTCTAACCATCGATTGGGCGCCGGGCCCAAGGTAGTGGCT
CATATTCTAT
UFO07751.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:21:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11843-RB | 1223 | CG11843-RB | 202..1146 | 9..950 | 4470 | 98.6 | Plus |
| CG11843-RA | 1048 | CG11843-RA | 27..971 | 9..950 | 4470 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:21:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29055099..29055418 | 366..685 | 1585 | 99.7 | Plus |
| 3R | 32079331 | 3R | 29054773..29055047 | 94..368 | 1375 | 100 | Plus |
| 3R | 32079331 | 3R | 29055490..29055760 | 683..950 | 940 | 95.6 | Plus |
| 3R | 32079331 | 3R | 29054548..29054632 | 9..93 | 425 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:21:31 has no hits.
UFO07751.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:21:14 Download gff for
UFO07751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11843-RA | 27..980 | 9..961 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:14:36 Download gff for
UFO07751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11843-RA | 27..980 | 9..961 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:01:17 Download gff for
UFO07751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11843-RA | 27..980 | 9..961 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:01:17 Download gff for
UFO07751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29054548..29054632 | 9..93 | 100 | -> | Plus |
| 3R | 29054773..29055046 | 94..367 | 100 | -> | Plus |
| 3R | 29055101..29055416 | 368..683 | 99 | -> | Plus |
| 3R | 29055491..29055769 | 684..961 | 93 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:14:36 Download gff for
UFO07751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24880270..24880354 | 9..93 | 100 | -> | Plus |
| arm_3R | 24880495..24880768 | 94..367 | 100 | -> | Plus |
| arm_3R | 24880823..24881138 | 368..683 | 99 | -> | Plus |
| arm_3R | 24881213..24881491 | 684..961 | 93 | | Plus |
