UFO07758.5prime Sequence
1095 bp (986 high quality bases) assembled on 2011-07-14
> UFO07758.5prime
CAGTCGACATGCAGTTGCTCCTTAAATCGATATTCACCTGCGCACTATTC
GTGATCTTTGTGTATGCCACCGCCCAGTCGCTGCTCAAAGTCCAGGAGAC
AGAAGCGCGGCAGGCGTACCTTAATGTTACCTCCTCCAGCAGTAGTAATC
TCAGCCAGGACGATGGCCACTTCCTCAGCCGGCGACTAAGGCAAGTCAGC
CATGGCGAGGAGGGCGACGAGGGCGCGCCGTCCCAAATGGACGACGAGTT
GGAACAGATGACCAAGGTGCATGGAGAAGCACCGGACGCGGAGGAGCTGC
GCGAATGTAGCGAGGGTCTTGTCCTGCCACTCTGGATGCCGCAACGCAAC
ATTTCGGTGGGTGACCGCCTCGTCCGCGGCTTTGTTTACTTCGTCCTACT
GATCTACCTGTTTGTGGGTGTGTCCATCATTGCGGATCGCTTCATGGCCG
CCATCGAGGCAATCACATCGATTGAACGGGCGGTGGTGGTCAAGGGACCC
AACAACACCAAGCAGGTGATGCACGTGCGCATCTGGAACGAAACGGTGGC
GAATCTAACGCTAATGGCCCTGGGATCGAGTGCCCCCGAGATCCTGCTCT
CGGTTATTGAGATTTATGCGAAGGACTTCGAGAGCGGTGACTTGGGACCT
GGCACCATCGTGGGATCAGCTGCCTACAACCTGTTTATGATTATCGCCGT
ATGCATGATCTGGATACCGGCGGGCGAGGTACGAAGGATCCGGCATCTGC
GAGTCTTCTTCGTTACCGCCCTCTTCTCGGTCTTCGCCTATGTGTGGCTG
TGGCTCATCCTATCCGTGTTCACGCCCGGCGTGATCCTGGTCTGGGAGGC
GATCGTGACCTTGCTATTCTTCCCGCTGACCGTGCTGTGGGCCTACATCG
CCGAGCGGCGTCTTCTGGTCTACAAATACTTGTACAAGAACTACCGGGTC
AATATGCGCGACACCGTGTTGCCGCGAGCACGACCAGATGCAGATGGATG
CGAGAAAGGGCCCAACAACCATTGTTCCATTCCGCTCACGAAACAACGCC
GAGGCCTTCACGAGGTCGGTCCGAGATAATCACTTGCTGACGGAG
UFO07758.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:22:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Calx-RI | 7361 | CG5685-RI | 561..1656 | 8..1095 | 4890 | 97.1 | Plus |
| Calx-RH | 5947 | CG5685-RH | 561..1656 | 8..1095 | 4890 | 97.1 | Plus |
| Calx-RG | 6705 | CG5685-RG | 1265..2360 | 8..1095 | 4890 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:22:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20992567..20993623 | 8..1059 | 4775 | 97.4 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:22:05 has no hits.
UFO07758.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:21:20 Download gff for
UFO07758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Calx-RC | 504..1603 | 1..1095 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:14:57 Download gff for
UFO07758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Calx-RE | 371..1470 | 1..1095 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:01:34 Download gff for
UFO07758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Calx-RG | 1261..2360 | 1..1095 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:01:34 Download gff for
UFO07758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20992563..20993662 | 1..1095 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:14:57 Download gff for
UFO07758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16818285..16819384 | 1..1095 | 96 | | Plus |
