UFO07763.5prime Sequence
1105 bp (993 high quality bases) assembled on 2011-07-14
> UFO07763.5prime
CAGTCGACATGGCCCTAACTAATCGGGATCGGGAACGGGGCTCTGGTCCA
TTGCCCAATCGCTGGCTATACTGTCCGCGCAAGAGCGATACCATCATTGC
GGAACGCTTCCTGGCCTTTAAGACCCCGCTGAGCAATAACTTTCACGACA
AGATGCCCATCGAGTGCACCTTTCAACCCGAGATGCTCTTCGAATACTGC
AAAACGCTAAAGGTGAAACTGGGCCTCTGGGTTGACCTGACCAATACGAA
ACGATTCTACGATCGATCCGCAGTGGAGGAGCTCGGCGCGAAATATATTA
AGCTGCAGTGCCGTGGACATGGCGAGACGCCATCGCCGGAGCAGACGCAC
AGTTTCATCGAGATCGTGGACAACTTTATTAACGAACGTCCATTTGACGT
TATAGCCGTGCACTGCACGCACGGTTTCAATCGCACTGGCTTCCTGATTG
TCTGCTATTTGGTCGAGCGACTCGATTGCTCCGTTTCGGCAGCGCTCGCT
ATCTTTGCCAGCGCCCGGCCGCCGGGCATCTACAAGCAGGATTACATCAA
CGAGCTGTACAAACGCTACGAGGACACGAATGCCGCTCCAGCGGCACCAG
AACAGCCCAATTGGTGCCTGGACTATGATGATGGCAACGGCGATGGTTTT
GTGCAGGACAACTCCTCATCCACGTCACAGCAGGCCGGCGAGCATGATGA
CGACGCCGAGGAGGTGGAGGGAGAGGATGCGGGCGGCGACTGTGACGCCT
CCACGTCGGACGGTCAGCCGCGTAAGAAGCGACGGCGCGAAATGATCATC
AAGAATGCCACCTTTATGGCGGGAGTGCCGGGCGTGCGACAGGTGAGCGA
TCAGCCGCGACTGGCGATCTGCAGCGTAAGTGCAGACTGGTGCGACTGGA
AAAGAACGGCTTCCCTGGCGCACAGCCCGTCTCCATGGACAGGGAGAACA
TAAGCGGCTAAGCGAGATACCGTATCGTGTGTCGTGAAGGCGAACGTACC
CGTTATATGATGCTCATCGATGAGTACGAGTATATTTTCTTCGATCGCCA
TCATTCTGTTCAAGTGGAGAATGTGTGACATGTGTGAGAGACAGGACTCT
AAACG
UFO07763.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:25:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRNA-cap-RA | 2243 | CG1810-RA | 242..1349 | 9..1105 | 4965 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:25:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14241497..14242315 | 1022..211 | 3700 | 98.8 | Minus |
| X | 23542271 | X | 14242373..14242581 | 217..9 | 1045 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:25:05 has no hits.
UFO07763.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:21:45 Download gff for
UFO07763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRNA-capping-enzyme-RA | 229..1337 | 1..1096 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:16:44 Download gff for
UFO07763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRNA-cap-RA | 232..1340 | 1..1096 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:02:46 Download gff for
UFO07763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRNA-cap-RA | 232..1340 | 1..1096 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:02:46 Download gff for
UFO07763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14241419..14242313 | 213..1096 | 96 | <- | Minus |
| X | 14242378..14242591 | 1..212 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:16:44 Download gff for
UFO07763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14135452..14136346 | 213..1096 | 96 | <- | Minus |
| arm_X | 14136411..14136624 | 1..212 | 98 | | Minus |
