UFO07764.5prime Sequence
1127 bp (1047 high quality bases) assembled on 2011-07-14
> UFO07764.5prime
CAGTCGACATGCCAGAAGAAGCAGAGACCTTTGCATTCCAGGCTGAGATT
GCTCAGCTGATGTCCCTGATCATCAACACATTCTACTCGAACAAGGAGAT
TTTCCTGCGCGAGTTGATCTCGAACGCTTCCGATGCCCTGGACAAGATCC
GCTATGAGTCCCTTACTGACCCCAGCAAGCTGGACTCTGGCAAGGAGCTG
TACATCAAGCTGATCCCTAACAAGACGGCTGGTACTCTGACCATCATTGA
TACCGGTATCGGTATGACCAAGTCCGACCTGGTCAACAACTTGGGAACCA
TCGCCAAGTCCGGAACCAAGGCCTTCATGGAGGCTCTGCAGGCTGGTGCC
GACATTTCCATGATCGGTCAGTTCGGTGTGGGTTTCTACTCCGCCTACCT
GGTCGCCGACAAGGTGACTGTCACCTCCAAGAACAACGATGACGAGCAGT
ACGTGTGGGAGTCCTCTGCCGGAGGCTCTTTCACAGTCCGTGCCGACAAC
TCTGAGCCCCTGGGCCGTGGCACCAAGATCGTGCTGTACATCAAGGAGGA
CCAGACCGACTATCTGGAGGAGAGCAAGATCAAGGAGATTGTTAACAAGC
ACTCCCAGTTCATTGGCTACCCCATCAAGCTGCTCGTAGAGAAGGAGCGC
GAGAAGGAGGTCAGCGACGATGAGGCTGATGATGAGAAGAAGGAAGGTGA
TGAGAAGAAGGAGATGGAGACTGATGAGCCCAAAATCGAGGATGTTGGCG
AGGATGAGGATGCCGACAAGAAGGACAAGGATGCCAAGAAGAAGAAGACC
ATCAAAGGAGAAGTACACTGAGGATGAGGAGCTGAACAAGACCAAGCCCA
TCTGGACCCGCAATCCCGATGATATCTCCCAGGAGGAGTACGGCGAGTTC
TACAAATCCCTGACCAACGACTGGGAGGATCATCTGGCCGTCAGCACTTC
CTCCGTGAGGGTCAGCTGGAGTTCCGTGCTCTGCTCTCATTCCCCGTCGC
ACGCCCTTCGATCTTCTTTGAGACCAGAAGAAGCGCACAAACATCAGCTG
TACGTGCGTCTGTCTTCATCATGACAACTGCAGGACCTCATTAGGTACTG
ACTCATGAAGGGTGGGGGCCGACTCCA
UFO07764.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:25:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Hsp83-RB | 2960 | CG1242-RB | 400..1527 | 9..1126 | 5130 | 97.9 | Plus |
Hsp83-RA | 2713 | CG1242-RA | 153..1280 | 9..1126 | 5130 | 97.9 | Plus |
Gp93-RA | 2841 | CG5520-RA | 434..496 | 90..152 | 195 | 87.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:25:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 3194499..3195587 | 9..1092 | 4875 | 98 | Plus |
Y | 3667352 | Y | 1974862..1975027 | 596..761 | 830 | 100 | Plus |
Y | 3667352 | Y | 1945382..1945547 | 596..761 | 815 | 99.4 | Plus |
Y | 3667352 | Y | 1959892..1960057 | 596..761 | 815 | 99.4 | Plus |
Y | 3667352 | Y | 1967986..1968151 | 596..761 | 815 | 99.4 | Plus |
U | 3151297 | U | 1163245..1163385 | 736..596 | 690 | 99.3 | Minus |
Y | 3667352 | Y | 1959696..1959750 | 63..9 | 275 | 100 | Minus |
Y | 3667352 | Y | 1974666..1974720 | 63..9 | 275 | 100 | Minus |
Y | 3667352 | Y | 1945186..1945239 | 63..10 | 270 | 100 | Minus |
Y | 3667352 | Y | 1967790..1967843 | 63..10 | 270 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:25:09 has no hits.
UFO07764.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:21:46 Download gff for
UFO07764.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp83-RA | 334..1469 | 1..1126 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:16:47 Download gff for
UFO07764.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp83-RA | 145..1280 | 1..1126 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:02:49 Download gff for
UFO07764.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp83-RA | 145..1280 | 1..1126 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:02:49 Download gff for
UFO07764.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 3194491..3195626 | 1..1126 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:16:47 Download gff for
UFO07764.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 3194491..3195626 | 1..1126 | 97 | | Plus |