Clone UFO07764 Report

Search the DGRC for UFO07764

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:77
Well:64
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptHsp83-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO07764.5prime Sequence

1127 bp (1047 high quality bases) assembled on 2011-07-14

> UFO07764.5prime
CAGTCGACATGCCAGAAGAAGCAGAGACCTTTGCATTCCAGGCTGAGATT
GCTCAGCTGATGTCCCTGATCATCAACACATTCTACTCGAACAAGGAGAT
TTTCCTGCGCGAGTTGATCTCGAACGCTTCCGATGCCCTGGACAAGATCC
GCTATGAGTCCCTTACTGACCCCAGCAAGCTGGACTCTGGCAAGGAGCTG
TACATCAAGCTGATCCCTAACAAGACGGCTGGTACTCTGACCATCATTGA
TACCGGTATCGGTATGACCAAGTCCGACCTGGTCAACAACTTGGGAACCA
TCGCCAAGTCCGGAACCAAGGCCTTCATGGAGGCTCTGCAGGCTGGTGCC
GACATTTCCATGATCGGTCAGTTCGGTGTGGGTTTCTACTCCGCCTACCT
GGTCGCCGACAAGGTGACTGTCACCTCCAAGAACAACGATGACGAGCAGT
ACGTGTGGGAGTCCTCTGCCGGAGGCTCTTTCACAGTCCGTGCCGACAAC
TCTGAGCCCCTGGGCCGTGGCACCAAGATCGTGCTGTACATCAAGGAGGA
CCAGACCGACTATCTGGAGGAGAGCAAGATCAAGGAGATTGTTAACAAGC
ACTCCCAGTTCATTGGCTACCCCATCAAGCTGCTCGTAGAGAAGGAGCGC
GAGAAGGAGGTCAGCGACGATGAGGCTGATGATGAGAAGAAGGAAGGTGA
TGAGAAGAAGGAGATGGAGACTGATGAGCCCAAAATCGAGGATGTTGGCG
AGGATGAGGATGCCGACAAGAAGGACAAGGATGCCAAGAAGAAGAAGACC
ATCAAAGGAGAAGTACACTGAGGATGAGGAGCTGAACAAGACCAAGCCCA
TCTGGACCCGCAATCCCGATGATATCTCCCAGGAGGAGTACGGCGAGTTC
TACAAATCCCTGACCAACGACTGGGAGGATCATCTGGCCGTCAGCACTTC
CTCCGTGAGGGTCAGCTGGAGTTCCGTGCTCTGCTCTCATTCCCCGTCGC
ACGCCCTTCGATCTTCTTTGAGACCAGAAGAAGCGCACAAACATCAGCTG
TACGTGCGTCTGTCTTCATCATGACAACTGCAGGACCTCATTAGGTACTG
ACTCATGAAGGGTGGGGGCCGACTCCA

UFO07764.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:25:11
Subject Length Description Subject Range Query Range Score Percent Strand
Hsp83-RB 2960 CG1242-RB 400..1527 9..1126 5130 97.9 Plus
Hsp83-RA 2713 CG1242-RA 153..1280 9..1126 5130 97.9 Plus
Gp93-RA 2841 CG5520-RA 434..496 90..152 195 87.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:25:08
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3194499..3195587 9..1092 4875 98 Plus
Y 3667352 Y 1974862..1975027 596..761 830 100 Plus
Y 3667352 Y 1945382..1945547 596..761 815 99.4 Plus
Y 3667352 Y 1959892..1960057 596..761 815 99.4 Plus
Y 3667352 Y 1967986..1968151 596..761 815 99.4 Plus
U 3151297 U 1163245..1163385 736..596 690 99.3 Minus
Y 3667352 Y 1959696..1959750 63..9 275 100 Minus
Y 3667352 Y 1974666..1974720 63..9 275 100 Minus
Y 3667352 Y 1945186..1945239 63..10 270 100 Minus
Y 3667352 Y 1967790..1967843 63..10 270 100 Minus
Blast to na_te.dros performed on 2014-11-27 00:25:09 has no hits.

UFO07764.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:21:46 Download gff for UFO07764.5prime
Subject Subject Range Query Range Percent Splice Strand
Hsp83-RA 334..1469 1..1126 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:16:47 Download gff for UFO07764.5prime
Subject Subject Range Query Range Percent Splice Strand
Hsp83-RA 145..1280 1..1126 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:02:49 Download gff for UFO07764.5prime
Subject Subject Range Query Range Percent Splice Strand
Hsp83-RA 145..1280 1..1126 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:02:49 Download gff for UFO07764.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 3194491..3195626 1..1126 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:16:47 Download gff for UFO07764.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3194491..3195626 1..1126 97   Plus