UFO07769.5prime Sequence
701 bp (701 high quality bases) assembled on 2011-07-14
> UFO07769.5prime
CAGTCGACATGCCCAAAAGCGAGGCCGCCACAATGATAACCAACAATAAT
TTGGATTATGACCAGGCCAGCGCCAGCAGCACAATAATAGCAGGAGCTAC
ATCGACGACCGCGGGCACAGCGGCAACATCGGTGGCCATGAGCAACAGAA
ATGGCAGCACCAGCAGCAGCAGCAACTCCTCGCCCACGGCGGACAATTCC
AATTCCAATTCCAACTCGAATTCAAACGCAAATATAAATCGGAATTTGAA
TCAGAACCCCAACTCGAACTCCAATACAAACTCCAATTCGTATTTCAACC
GATTCGACAATCGCATAGCTGCCAACTTGGCTGCCGTTTTAACTGGCGCA
GGAGCCCGTTTTCGATCCTCCTCCTGCAGCAATCGCCATCCAGCTGGAGT
TGCAAATCCGGCCGTTTTGAGATCACTACTCGCCACAATAAGCCGCAAGA
CTAGTCTGGCCACGCCCCCTTCACCAGCGAGTCTAGGACGACGCCGCCCA
CTGCAACTCTTCACGCACGCGAATCTCAATTGCAATGACAACGAGAAGGT
GGCCCAAACACCAAGCTCCGATGAGGATAATTCGCCCACCGAACTAAACA
GCTGCAAGCGATTGGCAGACAAACCTCCTCTGGTCAAACGCTTGACAATG
GGGCTTGCTGCGCCAAAACGAGGAGTCACGCCCATTGGTGGGGCGACATG
A
UFO07769.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:25:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
PVRAP-RA | 2919 | CG32406-RA | 805..1495 | 9..701 | 3400 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:25:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 6019337..6019857 | 9..529 | 2590 | 99.8 | Plus |
3L | 28110227 | 3L | 6020060..6020164 | 530..634 | 525 | 100 | Plus |
3L | 28110227 | 3L | 6024630..6024689 | 632..692 | 255 | 98.4 | Plus |
Blast to na_te.dros performed 2014-11-27 00:25:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6721..6821 | 73..176 | 215 | 70.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6809..6917 | 68..176 | 211 | 68.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6755..6863 | 68..179 | 203 | 68.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2421 | 70..176 | 188 | 69 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2412..2546 | 68..208 | 178 | 62 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1065..1241 | 89..270 | 169 | 57.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2739..2859 | 62..179 | 147 | 60.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2868..3005 | 68..194 | 141 | 61.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2313..2367 | 118..176 | 132 | 74.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2305..2364 | 113..176 | 122 | 68.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6733..6788 | 117..176 | 119 | 71.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1518..1572 | 121..176 | 115 | 69.6 | Plus |
Dtei\I-element | 5386 | Dtei\I-element DTEII 5386bp | 570..649 | 225..301 | 113 | 63.7 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1062..1097 | 141..176 | 108 | 77.8 | Plus |
I-element | 5371 | I-element DMIFACA 5371bp Derived from M14954 (g157749) (Rel. 44, Last updated, Version 2). | 595..628 | 252..285 | 107 | 79.4 | Plus |
UFO07769.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:21:49 Download gff for
UFO07769.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32406-RA | 793..1488 | 1..700 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:17:03 Download gff for
UFO07769.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32406-RA | 799..1494 | 1..700 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:02:58 Download gff for
UFO07769.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
PVRAP-RA | 799..1494 | 1..700 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:02:58 Download gff for
UFO07769.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6019331..6019857 | 1..529 | 99 | -> | Plus |
3L | 6020060..6020162 | 530..632 | 100 | -> | Plus |
3L | 6024631..6024696 | 633..700 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:17:03 Download gff for
UFO07769.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6012431..6012957 | 1..529 | 99 | -> | Plus |
arm_3L | 6013160..6013262 | 530..632 | 100 | -> | Plus |
arm_3L | 6017731..6017796 | 633..700 | 97 | | Plus |