UFO07770.5prime Sequence
1110 bp (1017 high quality bases) assembled on 2011-07-14
> UFO07770.5prime
CAGTCGACATGAAGTTTTCCTACAAATTTTCCAACCTGTTGGGCACAATA
TATCGTAATGGAAACTTGGTGTTCACACCGGATGGCAATTCCGTTATCAG
TCCGGTTGGCAATAGGATAACGGTCTACGATTTAAAAAACAACAAATCGC
GCACCTTGTCCCTGGAATCGCGGTATAACTACACGAACATAGCTCTTTCC
CCGGATGGAAGTCTGCTCATCGCAGTCAATGAAAAGGGTGAGGCGCAGCT
CATCAGCATGATGTCCTGTACGGTGATACATCGTCACAAGTTCCAGACGG
GCGTACAGTGCATCTGCTTCAGTCCAAATGGAGCATTCTTTGCCGTCGCT
GTGCAGAACGTAGTGTTGATATTCTGTGCACCTGGTGAGATCACAGGGGA
GTACAATCCTTTCGTCCTGCGCCGAAGATTCCTAGGTGGATTCGACGATG
TCACTTGGCTGGACTGGTCTTCGGACTCTCGACTTTTGGCAATCGGCTGT
CGGGATAGCTCCACCAAAATCGTTGCCATCAACTATACAAAGAACTTCCG
CACCTATAACCTAAGTGGCCACACAGACGCCATTGTAGCTTGTTTTTTCG
AGGCAAACAGCTTGCACTTGAACACCATAAGCCGCAATGGTCAGCTCTGC
TTGTGGGAATGCAGCCTAGCTCCCTCGGATTTAGAGGATGCTGAAAGGCC
AAAAATCGCTCCCCCTCAAAGGAAGAAGGAAAAGAAGGCAGTATCTGACA
ATGAGTCAGAAGATGACGTTGAAAATGTAGTGGAAAAGGATGCGTTGAAA
GAGGAATCTACCAAGGAAGCCGATGATGTCAACCATATAAAAATGAGGAC
GAGACGAAGAGTCACCCCTTCTTTTACAAAAAATAACTCGTCATTACTTG
GCCGATGAGCCGCGAAAAGACAGCGGGATGTACACTGACCGCGCAAACTA
CACACTCGTACCAGGTTTTGGTGGTAGCTTCAGTTCGGAGCTTTCTACCT
CTACGAATTGCCCGACGTCAATGATCATCGCTGGCATTTCCGACTATCTA
TTTCGGCGTTCTTCACTGCACTGGTGACTGTCGCATTGCCTCCGGAAAAA
TGGGCACTCG
UFO07770.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:24:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12325-RB | 3410 | CG12325-RB | 296..1402 | 9..1093 | 4985 | 97.8 | Plus |
| CG12325-RA | 3220 | CG12325-RA | 106..1212 | 9..1093 | 4985 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:24:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10823939..10824829 | 140..1021 | 3975 | 98.8 | Plus |
| 2R | 25286936 | 2R | 10823771..10823883 | 27..139 | 565 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:24:43 has no hits.
UFO07770.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:21:42 Download gff for
UFO07770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12325-RA | 94..1210 | 1..1096 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:16:34 Download gff for
UFO07770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12325-RA | 99..1215 | 1..1096 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:02:38 Download gff for
UFO07770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12325-RA | 99..1215 | 1..1096 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:02:38 Download gff for
UFO07770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10823771..10823883 | 27..139 | 100 | -> | Plus |
| 2R | 10823939..10824917 | 140..1094 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:16:34 Download gff for
UFO07770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6711276..6711388 | 27..139 | 100 | -> | Plus |
| arm_2R | 6711444..6712422 | 140..1094 | 97 | -> | Plus |
