UFO07776.5prime Sequence
1151 bp (1035 high quality bases) assembled on 2011-07-14
> UFO07776.5prime
CAGTCGACATGACCAAGGGAACCACTAGTTTTGGAAAGCGCCACAACAAG
ACGCACACCATCTGTCGCCGGTGCGGCAACTCGTCGTACCATCTGCAGAA
ATCGAAGTGCTCCCAGTGCGGCTATCCTGCGGCCAAGACCCGAAGCTTCA
ACTGGTCCCGAAAGGCCAAGGGTCGCAAGGCGCAGGGAACGGGAAGGATG
CGGTACCTCAAGAATCTGCGCCGTCGTTTTCGCAACGGATTGCGTGAAGG
AGGTGCCGCTAAGAAAAAAACCAACGCAAGCTTTCTAGACCATTCGTTTG
GCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCAT
AATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTC
ACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGAT
GGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTC
GATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATT
CATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACC
TGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCC
CATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAAT
CAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTC
TCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCAC
ATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGGTATTCAC
TCCAGAGCGATGAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAACAAG
GGTGACACTATCCCATATCACCAGCTCACCGTCTTTCATTGCCATACGAA
ATTCCGGATGAGCATTCATCAGCGGGCAGATGTGAATAAGCCGATAAACT
TGTGCTTATTTTTTCCTTTACGTCTTAAAAGCCGTAATATCCAGCCTGAA
CCGGTCTGTTATAGTACATGAAGCAACTGACTGAATGCCCTCAATGTTCT
TTACGATGCATTGGTATATCACGGTGATTCAGATTTTTTCCATTAGCTTC
C
UFO07776.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:26:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpL37b-RA | 422 | CG9873-RA | 106..372 | 9..275 | 1335 | 100 | Plus |
| RpL37a-RB | 565 | CG9091-RB | 114..346 | 9..241 | 265 | 74.8 | Plus |
| RpL37a-RA | 1296 | CG9091-RA | 114..346 | 9..241 | 265 | 74.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:26:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23100107..23100373 | 275..9 | 1335 | 100 | Minus |
| X | 23542271 | X | 15138989..15139115 | 137..11 | 215 | 78 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:26:02 has no hits.
UFO07776.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:21:53 Download gff for
UFO07776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL37b-RA | 81..357 | 2..280 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:17:14 Download gff for
UFO07776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL37b-RA | 100..376 | 2..280 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:11 Download gff for
UFO07776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL37b-RA | 100..376 | 2..280 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 01:03:11 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 16:17:14 has no hits.
