UFO07783.5prime Sequence
1099 bp (993 high quality bases) assembled on 2011-07-14
> UFO07783.5prime
CAGTCGACATGTGTGACGGCGATATGGCAATTGCGGAGCTGGAATCCCGT
CTGGATGAGGTCAGTCTGGAGGACATAGGTGCCAGACATCGTCGCGAGCG
CAAGGATTTGCAGGCCAAGCTGCAGGCCATGAAGAAGAATGCGCCGAAAA
ATAATAAAAACAAGCGGAAGGAGTTCCTGGAGGAGATGGCTCGCCTGGAG
GGAGAGCTGGAGCAGCGCCACAAGGCGGAACTGAAGGCAGCGGAAGCCAT
GGAGGCACCGGTGTTGGTGGAACCGGTCGTCAAAGAGCCAGCGGAAAAGC
CAGAAACTGAAGTGACAGACGATGATGGAATCGAGGAAAAAGAGGAACAG
CTGGCGCCCAATCAGCGTGTTTCCAAGGCACAGAAACGCCGGGACAAGAA
GGCAAAGGAGGCACGTGCACGAGAGGCAGAGATCAAGACGGAGCTGCAAA
ATGCTGCCAATCAGCCAACGCCCAAGTTAATCGAACTGCAGCAGATTACA
GCAAAGCTATCCCAACGCCAATTATCCCTTCACAATATACCCTCCGATGG
CGACTGCTTATATCAGTCCATCAGACACCAACTTATCGTAAATGCTCTTC
CAGGTCACAGTGTTCAGGAGTTGCGGGAGGAAACTGCCAATTATGTGCGT
GCTCACAAGGACTCGCTTATCTCATACATGATCCACCCGGAAACAGGAGA
CATTCTGAACGACCAACAATTCGAACAATACTGCCACGACATAGCAAAAA
CTCACGCTTGGGGTGGCCACATAGAACTGAAAGGCCATCTCATCGCTACT
CCGGGTGCCCATTGAAGTTATCCAAGCGGAAGGAGCACCGACGCTCCTGG
GGCAAGAGGAATTCGGTGGATCACCGCTGATCATCTGCTACCACCGCCAC
ATATACCAATTGGTGCCCACTACAATTCCACGGTGCCAGCAGCCGCAAGC
TTTCTAAACCATTCGTTTGGCGCGCGGGCCAGGTAGTGGTCATATTCATA
TCATATCATATCATAATCACCACTAGCTAGAAATCTGTCATGACTAAGTG
CTTGATCTCCCAATAAAACGCCCGGGGCACGACGTCTGGACACTCCGAT
UFO07783.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:25:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7857-RA | 1234 | CG7857-RA | 80..1017 | 7..944 | 4630 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:25:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15504217..15504815 | 605..7 | 2980 | 99.8 | Minus |
| 3L | 28110227 | 3L | 15503817..15504159 | 944..602 | 1620 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:25:43 has no hits.
UFO07783.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:21:50 Download gff for
UFO07783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7857-RA | 80..1020 | 7..948 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:17:07 Download gff for
UFO07783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7857-RA | 80..1020 | 7..948 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:00 Download gff for
UFO07783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7857-RA | 80..1020 | 7..948 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:03:00 Download gff for
UFO07783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15503817..15504157 | 604..944 | 99 | <- | Minus |
| 3L | 15504219..15504815 | 7..603 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:17:07 Download gff for
UFO07783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15496917..15497257 | 604..944 | 99 | <- | Minus |
| arm_3L | 15497319..15497915 | 7..603 | 99 | | Minus |
