UFO07785.5prime Sequence
1128 bp (1036 high quality bases) assembled on 2011-07-14
> UFO07785.5prime
CAGTCGACATGTCGGAGGTCCGCATTCGCCCGCGCCAGGTCCTCATCCTG
ATCATTGTCTTCCTCGTGGTGCTGATGATGGTGCACCGAAACGGGAAGCG
CACATGCCAGGGTCCAGAATACCTCCAGGCCATGTTCGTCCAAGGCGACA
CGTTACCCACGATTTACGCCGTAACGCCAACGTATCCACGGCCCGCCCAG
AAAGCCGAGCTAACCAGACTATCTCACCTCTTTATGCTGCTGCCGCACCT
GCACTGGATCATTGTGGAGGACACGAACGCCACCACTCCGCTGGTCAGAA
ACCTTTTGGATAGAGCCGGATTGGAGAAGCGTTCCACGTTGCTGAACATC
AAGACGCCATCTGAGTTCAAGCTGAAGGGCAAGGACCCCAACTGGATTAA
GCCACGCGGCGTGGAGCAAAGAAATCTGGCTTTGGCCTGGTTGAGGAACC
ATGTCGACGTCGATCGGCACTCTATAGTGTTCTTCATGGACGACGACAAC
TCCTACTCCACGGAACTGTTCGCCGAGATGAGCAAAATCGAAAGGGGTCG
CGTGGGCGTCTGGCCGGTGGGTTTGGTCGGCGGTCTGATGGTGGAGCGAC
CCCTGCTTACGGAGGATGGCACTAAGGTGACCGGATTCAATGCCGCTTGG
CGACCGGAAAGACCATTCCCCATCGACATGGCCGCCTTCGCCATCAGCAT
GGATCTCTTCATCAGGAATCCGCACGCCACGTTCTCGTACGAGGTGCAAA
GAGGCTATCAGGAGAGCGAGATCCTGAGGCATCTGACCACCAGGGATCAG
CTGCAGCCACTGGCCAATAGGTGCACGGATGTGCTCGTCTGGCACACGCG
CACTGAGAAGACCAAGCTAGCCGCCGAGGAGGCGCTCCTGAAGAAGGCCA
GCGATCCGATGGCGGCATGGAGGTCGCAAGCTTTCTAGACCATTCGTTTG
GCGCGCGGGCCCAGGTAGTGGTCATAATCATATCATAATCATAATCATAT
CCACACTAGCCTAGGAGATCCTGGTCATGACTAGTGCCTGATCTCACATA
AAAACGCCCGGGCGGCAACCGGACGTTCTGAACAATTCGAATGATTCTGA
AGTCATACTGATCTATCAACGGGAGTTC
UFO07785.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:26:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GlcAT-I-RA | 1560 | CG32775-RA | 76..993 | 9..925 | 4550 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:26:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4131555..4132266 | 215..925 | 3495 | 99.7 | Plus |
| X | 23542271 | X | 4131286..4131494 | 9..217 | 1045 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:26:29 has no hits.
UFO07785.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:21:57 Download gff for
UFO07785.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GlcAT-I-RA | 66..990 | 1..929 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:17:25 Download gff for
UFO07785.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GlcAT-I-RA | 72..996 | 1..929 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:20 Download gff for
UFO07785.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GlcAT-I-RA | 72..996 | 1..929 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:03:20 Download gff for
UFO07785.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4131282..4131494 | 1..217 | 98 | -> | Plus |
| X | 4131558..4132266 | 218..925 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:17:25 Download gff for
UFO07785.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4025315..4025527 | 1..217 | 98 | -> | Plus |
| arm_X | 4025591..4026299 | 218..925 | 99 | == | Plus |
