UFO07786.5prime Sequence
1158 bp (1035 high quality bases) assembled on 2011-07-14
> UFO07786.5prime
CAGTCGACATGTGTTTTTGCTGTGCTCGATTAATTAGTGGATCGTCACGG
AACTGGAGTTATAAAGTAAGCCGACGGTGCCAGACGAAGCTCAGACTGAC
TAAAAAAATGGCCCGGCATATAGCCCTGCTGATCTGCTCATTGCTAGCGA
TGGCTGGCTGTGATCCAATCGATGTGGACTGTACTCGCAGACAGGATTTC
AATATTGTCAAGGACTGCTGTGTCTATCCCACATTTAGGTTTGACCAGTT
CAAAAGCCAGTGTGGTAAATATATGCCAGTTGGTGCTCCCAGAATTTCAC
CCTGCCTCTATGAATGCATTTTCAATAAGACCAACACAGTTGTGGACGGA
GCTATTCATCCTGACAATGCCCGACTCATGCTGGAGAAGCTTTTCGGTAA
TCAGGACTTTGAAGAAGCCTATTTCAATGGTTTAATGGGCTGTTCGGATT
CTGTGCAAGAGATGATTAGCAACAGGAGGTCACGGCCCCAAAGAAAAACA
GAACAATGCTCTCCATTCTCACTTTTCTATGGAATTTGTGCCCAGAGATA
TGTCTTCAACCATTGTCCATCATCCAGCTGGTCCGGCACTGAATCTTGCG
AAATGGCCCGATTGCAGAACATGAACTGTTCGAAACCATCACGTGGTTCT
AGTCATCGCCTTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCA
GGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGC
CTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAAC
GCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGT
CATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTAC
GCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCT
GCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGATCGCCAGCGG
CATCAGCACCTTGTCCGCCTGCGTATATTTTGCCATGATGAAACGGGGCG
AGAGTGTTCCATATTGCCAAGTTTAATTCAACTGGGTGAAACCTCACCCA
GGATGGCTGAACGAAAACATATTCCTCATAACCTTAAGGAAAATAGAGCC
CCAGCTTT
UFO07786.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:26:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp50b-RB | 1648 | CG30073-RB | 960..1613 | 9..662 | 3270 | 100 | Plus |
| Obp50c-RC | 1648 | CG30072-RC | 960..1613 | 9..662 | 3270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:26:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14372612..14372971 | 303..662 | 1800 | 100 | Plus |
| 2R | 25286936 | 2R | 14372199..14372393 | 9..203 | 975 | 100 | Plus |
| 2R | 25286936 | 2R | 14372457..14372555 | 204..302 | 495 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:26:33 has no hits.
UFO07786.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:21:57 Download gff for
UFO07786.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp50c-RB | 960..1618 | 9..667 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:17:29 Download gff for
UFO07786.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp50c-RB | 960..1618 | 9..667 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:22 Download gff for
UFO07786.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp50c-RC | 960..1618 | 9..667 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:03:22 Download gff for
UFO07786.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14372199..14372393 | 9..203 | 100 | -> | Plus |
| 2R | 14372457..14372555 | 204..302 | 100 | -> | Plus |
| 2R | 14372612..14372976 | 303..667 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:17:29 Download gff for
UFO07786.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10259704..10259898 | 9..203 | 100 | -> | Plus |
| arm_2R | 10259962..10260060 | 204..302 | 100 | -> | Plus |
| arm_2R | 10260117..10260481 | 303..667 | 99 | == | Plus |
