UFO07787.5prime Sequence
1072 bp (969 high quality bases) assembled on 2011-07-14
> UFO07787.5prime
CAGTCGACATGCGATACATAAAGTCGGAGCCGTACTATGAAGGGCTTCCT
CCATTCAATGTCAGCGGCAGCCCGTTCAATGTGGTTCCCATTCACAACTA
CCCGGAGCTTATGAAAGACACTTGCGCCCTAATCAACGCAGAGTGGCCAC
GATCGGAAACGGCGCGCATGCGCTCCCTGGAGGCCTCCTGTGACAGCCTA
CCCTGCAGCCTGGTGCTGACCACCGAGGGAATGTGCCGCGTGATCGCTCA
CCTCAAGCTCAGCCCGATCAATTCCAAGAAGAAGGCCTGCTTCGTCGAGT
CCGTGGTGGTGGACAAGCGGCACCGTGGCCAGGGATTCGGCAAGCTGATC
ATGAAGTTCGCCGAGGACTATTGCCGCGTCGTGCTGGACCTCAAGACCAT
ATATCTGTCCACCATCGACCAGGATGGATTCTACGAACGCATTGGCTACG
AGTACTGCGCTCCCATTACAATGTATGGGCCGCGCCACTGTGAGCTGCCC
AGCTTGCAAAATGCCAAAAAGAAATACATGAAGAAGGTCTTAGCAAGCTT
TCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATA
ATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGA
CTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGT
TCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACA
GGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATC
GCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCAC
AAACGGCATGATGAACCTGATCGCCAGCGGCATCAGCACCTTGTCGCCTG
CGTATATATTTGCCCATGTGAAACGGGGCGAAGAGTGTCATATTGCACGT
TAATCAAACTGTGAACTCACCAGGATGCTGAACGAAAAACATATTCCTCA
TAACCTTTAGAATAGCAGTTTCACGTACCGCCAATCTGCAATATATGTGT
AGAACTGCGATTCGTCTGATCA
UFO07787.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:26:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8481-RB | 1506 | CG8481-RB | 369..902 | 9..542 | 2670 | 100 | Plus |
| CG8481-RA | 1412 | CG8481-RA | 308..808 | 42..542 | 2505 | 100 | Plus |
| MED6-RB | 1758 | CG9473-RB | 1..62 | 103..42 | 310 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:26:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9768923..9769423 | 42..542 | 2505 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:26:37 has no hits.
UFO07787.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:21:58 Download gff for
UFO07787.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8481-RB | 345..885 | 1..542 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:17:32 Download gff for
UFO07787.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8481-RB | 362..902 | 1..542 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:23 Download gff for
UFO07787.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8481-RB | 362..902 | 1..542 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:03:23 Download gff for
UFO07787.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9768799..9768838 | 1..41 | 92 | -> | Plus |
| 3R | 9768923..9769423 | 42..542 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:17:32 Download gff for
UFO07787.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5594521..5594560 | 1..41 | 92 | -> | Plus |
| arm_3R | 5594645..5595145 | 42..542 | 100 | == | Plus |
