UFO07792.5prime Sequence
1056 bp (955 high quality bases) assembled on 2011-07-14
> UFO07792.5prime
CAGTCGACATGTCCAAACTGTCATCTGGTGGTCCCTCCATGGCGGCCAAG
CTGCTGGCCATAATGCTTCTGCTGGTGGCGACGGGAGTGCAGGCGCGGCG
TCTGGGCCACCGACGCCTAATCATCCACGTGCCGGTCAAGGTGAAGACGC
ACCACCACACTCACACCGTGTACAAGGTGCTACACGGATCACATGGTGGC
GGTGGCGGCGGAGGTGTAAAGCAAACGGTATACAAAGTGCTTGGCTTCTC
CACACACGGTGGTGGCATTGCCAAGGGCGGCGTAGGAGGAGGAGGAGGCA
TTGGCCATGGAGCCCACGGTAGCTACGACATGGGCAGCATAGGAGGAATG
GGACACGGCGAAATCACATACGAGGACATGCACGGATGCGAGAGCGGCAA
AGTGATTCCGGCGGCCAGAGACATGATTTTCAATCACTACTCGCGTCACG
GCCAAAGCGATGGAACTGCCGAGGATTACGCCGAGGAGCTGGACGACTTT
GTAGACCTAAGGGATGGCTGGTTGGCAAGCTTTCTAGACCATTCGTTTGG
CGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATA
ATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCA
CCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATG
GAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCG
ATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTC
ATTAAGCATTCTGCCGACATGGAAGCCATCACAACGGCATGATGAACCTG
ATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATATATTTGCCCATG
TGAAACGGGGCGAGAGTTGTCCATATGCCACGTTTAATCAAACTGTGAAC
TCACCCAGGATGCTGAACGAAAAAATATTCTCATAACCCTTTAGCAATAG
CCAGTTCACCGTAACGCCCAAATCTGCAATATTGTGTGAACTGCGATCGT
CTGATC
UFO07792.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:27:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13931-RB | 1063 | CG13931-RB | 106..621 | 9..524 | 2580 | 100 | Plus |
| CG13931-RA | 663 | CG13931-RA | 106..621 | 9..524 | 2580 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:26:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1701398..1701904 | 524..18 | 2535 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:26:59 has no hits.
UFO07792.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:02 Download gff for
UFO07792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13931-RA | 99..625 | 1..528 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:17:44 Download gff for
UFO07792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13931-RA | 99..625 | 1..528 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:32 Download gff for
UFO07792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13931-RA | 99..625 | 1..528 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:03:32 Download gff for
UFO07792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1701398..1701907 | 15..524 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:17:44 Download gff for
UFO07792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1701398..1701907 | 15..524 | 99 | | Minus |
