UFO07795.5prime Sequence
1093 bp (1006 high quality bases) assembled on 2011-07-14
> UFO07795.5prime
CAGTCGACATGTGTTTTAATGTACTGGGAGTGAGCAATCTGCTACCCGAT
TGCAGCATTGCAAACCGGGTCCATCTGTTCTCTTTGCTGCAGCAACTCCA
GAACCAGGAGCGTCGTCCGGAGGAAGTGAGTGACGAGTTGCGGGATCGCT
ACAACGTATTTCGCCAGGTTTTGCCCAACTACCCGCCACCGGAACAGCCA
GACGACGATATGCTAGCAAACTTTGATGAGTTATTCCAGGAGCAGCTTTC
AATATCGATCTTCACAGACACTGAATCATCCGGCGAGGAGACCTGCGAAT
CCAGTCTGGATAGTGACTCCGAGCAGATCAGCATCGGGATGGATCGTCAT
CATGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGG
TCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGAT
CCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGG
CAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGG
ATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCC
TGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATG
GAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCA
CCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAG
AAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCA
GGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAAT
AGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGATATATGTGTAGAA
ACTGCCGGAATCGTCGTGTATTCACTCCAGAGCGATGAAAACGTTTCAGT
TTGCTCATGAAAACGTGTAACAAGGTGACACTATCCATATCACAGCTCCC
CGTCTTCATGCATACGAATCGATGACCATTCATCAGCCGCCAAGATGTGA
TAAGCGGATAACTTGGCTATTTTCTTACGGCTAAGCTAATTCA
UFO07795.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:26:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15172-RD | 629 | CG15172-RD | 161..506 | 8..353 | 1730 | 100 | Plus |
| CG15172-RC | 574 | CG15172-RC | 108..453 | 8..353 | 1730 | 100 | Plus |
| CG15172-RB | 631 | CG15172-RB | 165..510 | 8..353 | 1730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:26:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19023178..19023523 | 8..353 | 1730 | 100 | Plus |
| 2L | 23513712 | 2L | 19075260..19075375 | 185..70 | 460 | 93.1 | Minus |
| 2L | 23513712 | 2L | 19075157..19075250 | 311..218 | 365 | 92.6 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:26:24 has no hits.
UFO07795.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:21:56 Download gff for
UFO07795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15172-RA | 12..360 | 1..353 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:17:23 Download gff for
UFO07795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15172-RB | 162..510 | 1..353 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:19 Download gff for
UFO07795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15172-RB | 162..510 | 1..353 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:03:19 Download gff for
UFO07795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19023175..19023523 | 1..353 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:17:23 Download gff for
UFO07795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19023175..19023523 | 1..353 | 98 | == | Plus |
