UFO07801.5prime Sequence
1101 bp (1002 high quality bases) assembled on 2011-07-14
> UFO07801.5prime
CAGTCGACATGATGTCGAAAGATTTTGATTTTTCTCAGAAGGGTATGAGC
GACGCCACTAGTAGCGACTTACGTAACGAGTCAGCACATCCAACATTCTC
TGGGACTAAGCAACTTTTCACGTTAAGCTCGCCGTTTTACCAGGGACCCA
CGTCCTTTGGCGGTAGTGCGGCTATTACTCGCGTTTGGAACAATTTTAAG
TGCAGCAGAATACTTGCTTCTGAAATCAACAAAAAGATGGAACCGCCAAC
TTATTCGGAGTCCTTAGAGTCGAAGATCATGAAACGCCGTCGTCTGTACG
CTCTTTTAAATAGGAAAGAAATTACGTATAGCAAATACCGGAATATACAG
AATGAGTCCCGGATAGGAATCATTAAAGAGGTGGAGGAAACACAAATGCC
AGAAACCACATATAAGAAGAAATCGCTTACGAAACCAGTTATGCGAACAT
TCTACTTCTCGGAGCCTATACCGCTAATGCAACATAATTCAAAGCGCAAT
TTTGTATTTTCCGACCCAATTCCTCTGGATGCAAGCTTTCTAGACCATTC
GTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATA
ATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGA
TTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATC
CAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCG
AGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTG
TAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGAT
GAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATATATT
TGCCCATGTGAAACGGGGCGAGAGTTGTCATATTGCCACGTTTAATCAAA
CTGTGAACTCACCCAGGATGCTGAAACGAAAACATATCTCAATAAACCCT
TTAGAATAGCAGTTTCACGTAACCGCCATCTGCGATTATGTGTAGAACTG
CGAATCGTCTGCATTCATAGAGCGTACGTTCAGTGCCTATGAACCGGTTA
A
UFO07801.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:27:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30447-RC | 805 | CG30447-RC | 57..579 | 8..530 | 2600 | 99.8 | Plus |
| CG30447-RB | 808 | CG30447-RB | 60..582 | 8..530 | 2600 | 99.8 | Plus |
| CG30447-RA | 785 | CG30447-RA | 37..559 | 8..530 | 2600 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:27:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19947332..19947854 | 8..530 | 2600 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:27:33 has no hits.
UFO07801.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:07 Download gff for
UFO07801.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30447-RB | 31..557 | 1..530 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:18:02 Download gff for
UFO07801.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30447-RA | 35..561 | 1..530 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:46 Download gff for
UFO07801.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30447-RA | 33..559 | 1..530 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:03:46 Download gff for
UFO07801.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19947328..19947854 | 1..530 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:18:02 Download gff for
UFO07801.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15834833..15835359 | 1..530 | 99 | == | Plus |
