UFO07803.5prime Sequence
1116 bp (1009 high quality bases) assembled on 2011-07-14
> UFO07803.5prime
CAGTCGACATGTTCCCAAAGTCGGGGAAGACATGTGCGCTTCTTGCAGCC
CGTTTGCCTTATGGGTTTGCGTTTAATCAACTCAAGACGATGTCACCTGT
TCATCTCTTTCACTCGACTGCCTTAATGCAAAACTACATAAGTGGAACAA
GAAAACCAATTTCAATCAGAGAAAAACGGGAATACAAATATTCATCTCAA
GACATGAACTGGACGAAACATGGAGGATGCTTTAAGCAAAACTACAGTAC
CGAATCCGCCTCCACGGGGACCGCAACGACCTTAAAGATAACTAAAAGGG
AACAACTGAAGCGGGCATTCAAGGAGTATGGAGCAACCATTGTTGTCTTT
CATGTGGTCATTTCCGTCATTTCTCTTGGAGGCTTTTATGCACTTGTTTC
CAGTGGAATAAACCTGGTGCCCGTACTGGAATACTTTGGAATGGGTTCAT
CGGCGGTTGCGGAGAAAGTTGCCGCAGGAAGCACCTTTGTTGTGGCCTTT
GCCGTTCATAAAATCTTTGCGCCAGCCAGAATCAGCATCACATTGGGCAC
CACACCGTTTATCGTGAGGTATTTGCGATCCAAGGGACTTCTGAAGCCAA
AAAGCACAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTA
AGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAG
GAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCC
GGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATT
ACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCC
CGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCG
ACATGGAAGCCATCACAAACGGCATGATGAACCTGATCGCCAGCGGCATC
AGCACTTGTCGCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGCGAG
AGTTGTCCATATTGCCCACGTTTAATCAACTGTGAACCTCACCCAGGATG
CTGAAACGAAACAAATTCTCAATAACCGTTTAGGAATGCAGGTTCACCGT
AAACGCCAACTTGCAT
UFO07803.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:27:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15403-RA | 855 | CG15403-RA | 131..730 | 9..608 | 3000 | 100 | Plus |
| CG17508-RA | 1228 | CG17508-RA | 719..971 | 289..541 | 320 | 75.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:27:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3128765..3129364 | 9..608 | 3000 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:27:42 has no hits.
UFO07803.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:08 Download gff for
UFO07803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15403-RA | 46..645 | 9..608 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:18:05 Download gff for
UFO07803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15403-RA | 131..730 | 9..608 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:49 Download gff for
UFO07803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15403-RA | 131..730 | 9..608 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:03:49 Download gff for
UFO07803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3128765..3129364 | 9..608 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:18:05 Download gff for
UFO07803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3128765..3129364 | 9..608 | 100 | == | Plus |
