UFO07805.5prime Sequence
1094 bp (1008 high quality bases) assembled on 2011-07-14
> UFO07805.5prime
CAGTCGACATGGCTTGGGTTCCCACATCACGATTCGAGCACGATCTGGTG
CAGTTGGAGCCGCACTTTAATCTGGTCCATGGACAGATCGCCTATGAACT
GAGGAAGAAAGAGGAATTCTCAGAATCCGTTCCCATTCATACCTATGAGC
TTTTGACAGCCCGCGAGGATCTGCTTGGATATGGCACGCGGGGTGGAAAG
GGCCGAGAGATTCGTCAAAGTCTGCAAATGATGGAGACGATTCAGAGAGT
AGCTGGCACCAAGCCGCTGGGAGAGCACGCCACAATGGAGGACTGGGAGG
ACACCACAATGGTGGACGTGGAGGCGATTGCCATCATCCGGAACTTCGGA
AGAATGACCCTGAAACAGGACTCACTGACACTCCAGCCGCAGATCAGCTT
ACCTGCGGTTGCTCCAAATGAAAGCCAGCGATTTCCTTTAATCACAGATC
GCGACTTCTTCACGCCACGAAAGATTCGTAGACCAAAGGATCTTCCGCCA
GTGGAGAACAGTCCGGATAACTCAGCCGATGACTCATTTCACACCGCTAA
AAGTCTGAGCAACTGCATCTGGCTGAACGGATTAAAATATCCAGATAAGA
CCAGCAAGGGCGAAATTCAGAATACAGCAAGCTTTCTAGACCATTCGTTT
GGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCA
TAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCT
CACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGA
TGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCT
CGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAAT
TCATTAAGCATTCTGCGACATGGAAGCCATCACAAACGGCATGATGACCT
GATCGCAGCGGCATCAGCACCTTGTCGCTTGCGTATATATTTGCCATGGT
GAACGGGGCGAGAGTGTCATATGGCCCGTTTAATCAAACTGTGAACTCAC
CAGGATTGCTGGAAACGAAACCTATTCTCATTAATCCTTTAAGG
UFO07805.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:27:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15484-RA | 913 | CG15484-RA | 182..800 | 8..626 | 3095 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:27:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12706912..12707530 | 626..8 | 3095 | 100 | Minus |
| 2L | 23513712 | 2L | 22391702..22391755 | 314..261 | 210 | 92.6 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:27:45 has no hits.
UFO07805.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:09 Download gff for
UFO07805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15484-RA | 54..679 | 1..626 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:18:06 Download gff for
UFO07805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15484-RA | 175..800 | 1..626 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:52 Download gff for
UFO07805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15484-RA | 175..800 | 1..626 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:03:52 Download gff for
UFO07805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12706912..12707533 | 1..626 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:18:06 Download gff for
UFO07805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12706912..12707533 | 1..626 | 99 | | Minus |
