UFO07806.5prime Sequence
1150 bp (1020 high quality bases) assembled on 2011-07-14
> UFO07806.5prime
CAGTCGACATGTTACACCTGAGATTTGTCTTTATGGCCGCTTTACCGCTG
CTGCTGTTGCTTCTACTTCAGTTTAGTCCACCTGCAGATGGCTTTATCAT
TCGACTGATTACGGAGACACTGCAGAATAACGTGGCTGGTGAGCCGGTTC
TTCACGAGCGGACTTCTTGGGACTTTGATCCGGAGGCGGCCAAGAGGGCC
AGATCGCTGTACTACGAGAAGAACGGATTCCGCTCGTCCAAATTCATCGA
GCGACTGGGCGTTGGTCTGGATGGGCGGCACGAGGAGCGGCGGGCGGAGC
AAGGACATCGCGATGTGGGACGACTGAATGGGGAACACAATGTGAACTAT
CCGCCTCCACCGGCTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGC
CCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACT
AGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAA
AACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGA
GGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAAT
TACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCAT
TCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCA
GCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAA
ACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAATCAAAACTGGTG
AAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCC
TTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAAT
ATATGTGTAGAAACTGCCGGAATCGTCGTGGTATTCCCTCAGAGCGATGA
AACGTTTCAGTTTGCTCATGGAAAACGTGTACCAGGTGACACTATCCCAT
TATCACCAGCTCACCGTCTTTCATGCATACGAAAATTCCGGATGACATTC
ATCAAGGCGGGCAAGAATGTGAATAAAGGCCGATAACCTTGGGCTTATTT
TTCTTTAACGGCCTTAAGCGTGACATCATGCCTGAACGTCTGTTATAGGT
UFO07806.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:27:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15649-RB | 766 | CG15649-RB | 78..434 | 9..365 | 1785 | 100 | Plus |
| CG15649-RA | 462 | CG15649-RA | 78..434 | 9..365 | 1785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:27:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20973458..20973634 | 218..42 | 885 | 100 | Minus |
| 2R | 25286936 | 2R | 20973248..20973396 | 365..217 | 745 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:27:49 has no hits.
UFO07806.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:10 Download gff for
UFO07806.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15649-RB | 51..418 | 1..371 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:18:10 Download gff for
UFO07806.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15649-RA | 71..438 | 1..371 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:53 Download gff for
UFO07806.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15649-RA | 71..438 | 1..371 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:03:53 Download gff for
UFO07806.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20973248..20973394 | 219..365 | 100 | <- | Minus |
| 2R | 20973458..20973634 | 42..218 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:18:10 Download gff for
UFO07806.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16860753..16860899 | 219..365 | 100 | <- | Minus |
| arm_2R | 16860963..16861139 | 42..218 | 100 | <- | Minus |
