UFO07807.5prime Sequence
1106 bp (1021 high quality bases) assembled on 2011-07-14
> UFO07807.5prime
CAGTCGACATGTTGAAGGACACCGCCACCGCATCGACCAGCGAACTTGCA
GGGGAAGTGGGTGACGCCCATTCGACTCCTGGCAGCTGCCCTCCGCCCGC
CGCGGGCGACACGCCCCCCGTCGTTAGCCGACCGCTGGACCGACGCCTAA
ACCCCAACGCACCTGTGTTTGTGCCCGACTTCAAGGCCAGCCAGGTGGCC
AAAAAGCTATTTGATGAGTTATCTACGTACACCCGGTGGAGTACGGCAAC
CTCGGAGGACATATGCTACGAGCCCCGTTACGAGTCCATCTGGCGTGAGG
CCAGCATCCAGCAGCAGCAGGGTCTGCGCCATCCGGGTTTCGTTTACAGC
CTGGATCCTGGCGAGGAGGAGGTTGGCGAACTGGAGTTTGACGAAGTCCA
GGCCATGAATATCGGAGCCGAGTCCTATGATCCCAAGCTAGGAAGCACAT
CAGTTAGCCAGGCAATGGAAGTTCGCGAAACTGTGGGTGATGTGGAGGAA
CCTTTAGATGAGGAAAAAAGGAATGGCTTTCAGAATCGCCACTCCGCCAG
ACCGGCCAAAAAGTGCTGTCTGGTCATGGCAAGCTTTCTAGACCATTCGT
TTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAAT
CATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATT
CTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCA
GATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAG
CTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTA
ATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGA
ACCTGATCGCAGCGCATCAGCACCTTGTCGCTTGCGTATATATTGCCATG
TGAACGGGGCGAAGAGTGTCATATTGCACGTTTAATCAAACTGTGAAACT
CACCCAGGATGCCTGAACGAAAACTATTTCTCAATAACCTTTAGCAATAG
CAGTTTCACCGGTAACGCCCCATTCTGCCATATTGTGTGAAACCTGCGGA
ATCTCT
UFO07807.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:27:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15136-RB | 897 | CG15136-RB | 237..807 | 8..578 | 2855 | 100 | Plus |
| CG15136-RA | 747 | CG15136-RA | 87..657 | 8..578 | 2855 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:27:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17047251..17047609 | 578..220 | 1795 | 100 | Minus |
| 2L | 23513712 | 2L | 17047771..17047982 | 219..8 | 1060 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:27:53 has no hits.
UFO07807.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:10 Download gff for
UFO07807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15136-RA | 79..657 | 1..578 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:18:12 Download gff for
UFO07807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15136-RA | 79..657 | 1..578 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:54 Download gff for
UFO07807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15136-RA | 79..657 | 1..578 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:03:54 Download gff for
UFO07807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17047251..17047609 | 220..578 | 100 | <- | Minus |
| 2L | 17047771..17047987 | 1..219 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:18:12 Download gff for
UFO07807.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17047251..17047609 | 220..578 | 100 | <- | Minus |
| arm_2L | 17047771..17047987 | 1..219 | 98 | | Minus |
