UFO07808.5prime Sequence
1104 bp (991 high quality bases) assembled on 2011-07-14
> UFO07808.5prime
CAGTCGACATGGTTTGCGAGAAGTGCGAGGCCAAGCTCTCCAAAGTTTCA
GCGCCCAATCCCTGGCGAACGAGCACAGCTCCTGCGGGAGGACGTAAAAT
CAACGAGAACAAGGCTTTATCCTCGGCCCGCGAGCGATACAATCCCATAG
GGACTGCTTTACCACCTTGCCGAATCTGCCGACAGAAAGTGCACCAGATG
GGTTCGCACTATTGCCAGGCGTGCGCCTACAAAAAGGCCATATGCGCCAT
GTGCGGCAAGAAGATCATGAACACTAAGAACTACAAGCAGAGCTCAACGG
CAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCAT
AATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTG
GTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAAC
CGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCT
ATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCC
ACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAG
CCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTT
GTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGT
TGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGA
TTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGC
CAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACT
GCCGGAAATCGTCGTGGTATTCACTCCAGAGCGATGAAAACGTTTCAGTT
TGCTCATGGAAACGTGTAACAAAGGTGAACACTATCCCATATCACAGCTC
ACGTCTTTCATTGCCATACGAAATTCCGGATGAGCATTCATCAGGCGGGC
AGATGTGATAAGGCCGATAAAACTGGTGCTTATTTTTCTTTACGGTCTTT
AAACGCCGTAAATATCAAGCTGAACCAGCTGTTTAGTTACTTGAGCCACT
GACT
UFO07808.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:27:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4537-RB | 393 | CG4537-RB | 26..316 | 9..299 | 1440 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:27:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9890910..9891073 | 9..172 | 820 | 100 | Plus |
| 2L | 23513712 | 2L | 9891132..9891259 | 172..299 | 625 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:27:57 has no hits.
UFO07808.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:11 Download gff for
UFO07808.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4537-RB | 26..322 | 9..305 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:18:14 Download gff for
UFO07808.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4537-RB | 26..322 | 9..305 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:54 Download gff for
UFO07808.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4537-RB | 26..322 | 9..305 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:03:54 Download gff for
UFO07808.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9890910..9891073 | 9..172 | 100 | -> | Plus |
| 2L | 9891133..9891259 | 173..299 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:18:14 Download gff for
UFO07808.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9890910..9891073 | 9..172 | 100 | -> | Plus |
| arm_2L | 9891133..9891259 | 173..299 | 99 | == | Plus |
