UFO07810.5prime Sequence
1136 bp (986 high quality bases) assembled on 2011-07-14
> UFO07810.5prime
CAGTCGACATGGATTTGTTTAGCTCTCTGCTGCTGTGCCTGGGAATTATT
TCATTACCCAATGTGTTTACGATTTGCATTCCGCCCAATCACTGCATTGA
AGATATGGAGGAAAGCGATGCGAAAGAGCGATTCGACTATGTACTTGGCA
AATATGAGGAGGTGGAAATGAATATTCCCGGAAAACCAGTTGGTTTGTAT
GGGAAAGTGGTTACGCATGGCGAGGCGGAGGAGCAGCACTTGGTGTTCCA
GTACATGGACAATACGCTGCATGACATCATCCAGACGTGTGCGTTTGTGG
TCAAGCGGAATCCCGGTGAGTGCGAGAACATCCGCACCTACTGCTCGGCC
TTTCTGAGCCGCCTGCCACGCCCCCTGCTGGAGCGCAAGCCCATCAACGT
GTGTGACGATGGGACGCGAGTGGCGGAGGACGAGCCGGAAACGGAAGCGG
AAGACAATCCGGATGCAGATGCTGAGGGGGAGACTGATCCGCAGCAGGAG
CAGGGAGTTGGTCAAGCGGAGACCACAACAGCGGAGCCGGCTAGCTCCAA
ATTAAGTGAATTTTATGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGG
CCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAAC
TAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAA
AAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTG
AGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAA
TTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCA
TTCTGCCGACATGGAAGCCATCACAACGGCATGATGAACCTGAATCGCCA
GCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAA
ACGGGGCGAAGAGTTGTCCATATTGCCCACGTTAAATCAAACTGTGAAAC
TCACCCAAGGATTGGCTGAAACGAAAAACTATTCTCATAAACCTTTAAGG
AATAGGCCAGCTTTACGTACACGCCAACTCTTGCCAATTATTGTGTAGAA
CCTGCCGAAATCGTGCGGTATTTCACTCCCCGAGAC
UFO07810.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:27:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14854-RB | 663 | CG14854-RB | 7..565 | 8..566 | 2795 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:27:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 14559264..14559637 | 566..193 | 1870 | 100 | Minus |
3R | 32079331 | 3R | 14559702..14559790 | 193..105 | 445 | 100 | Minus |
3R | 32079331 | 3R | 14559991..14560048 | 65..8 | 290 | 100 | Minus |
3R | 32079331 | 3R | 14559896..14559935 | 104..65 | 200 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:27:25 has no hits.
UFO07810.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:06 Download gff for
UFO07810.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14854-RB | 1..565 | 4..566 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:17:57 Download gff for
UFO07810.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14854-RB | 1..565 | 4..566 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:43 Download gff for
UFO07810.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14854-RB | 1..565 | 4..566 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:03:43 Download gff for
UFO07810.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 14559264..14559636 | 194..566 | 100 | <- | Minus |
3R | 14559702..14559790 | 105..193 | 100 | <- | Minus |
3R | 14559896..14559934 | 66..104 | 100 | <- | Minus |
3R | 14559991..14560051 | 1..65 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:17:57 Download gff for
UFO07810.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 10384986..10385358 | 194..566 | 100 | <- | Minus |
arm_3R | 10385424..10385512 | 105..193 | 100 | <- | Minus |
arm_3R | 10385618..10385656 | 66..104 | 100 | <- | Minus |
arm_3R | 10385713..10385773 | 1..65 | 93 | | Minus |