UFO07811.5prime Sequence
1125 bp (994 high quality bases) assembled on 2011-07-14
> UFO07811.5prime
CAGTCGACATGTTGCTAAATAAGAAAGAACTCATGTACAAACAGCTGGTG
GAAAAACTGTATGACAGGTGCCAAAGGATTCAGGCGGAAAATGAGCGATG
TGTGATGAGAGTAAATGGGATCAAAAAGATAGTAAGAAGGCGCAATCATG
ACGTGGAGCTTCTAAAACGGCGACTAGATAAGCACGGAGACGACTGGCGA
TCCGTTCCCATGGAGGCTCCACATCCCAAAGGGAAAACCGAGCAGAAGCG
TCGAGGACCGAAGCCCAAAAACAAGCAGGCGGCGGATGAAACAGGAGCAC
CCGGGTCTGAGCCTGGACCCAATACTCCAGCTGCCCGGAAACCCCGAAAG
CAAAAAGCCAAACAGGCACCCATCAATCCCAATCCAGTCATTGCACCACC
GCATCAACAACCTCAACCTCCACTGTTGACCGCAAGCTTTCTAGACCATT
CGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCAT
AATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGG
ATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAAT
CCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGC
GAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTT
GTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGA
TGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATA
TTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGT
TTAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACA
TATTCTCATAAACCCTTTAGGGAATAGGCCAGGTTTCACCGTAACACCGC
CACATCTTGCGAATATATTGTGTAGAACTGCCGGAAATCGTCGTGTATTT
CACTCCAGAGCGATGAAACGTTTCAGTTTGCTCATGAAAACCGTGTACAG
GTGAACCTATCCCATATCACCAGCTCACCGTCTCATGGCATCCGAAATTC
GGATGAACATTCATCAGCCGGCAGA
UFO07811.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:27:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32202-RA | 616 | CG32202-RA | 94..516 | 9..431 | 2115 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:27:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18682437..18682760 | 108..431 | 1620 | 100 | Plus |
| 3L | 28110227 | 3L | 18682277..18682377 | 9..109 | 505 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:27:29 has no hits.
UFO07811.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:06 Download gff for
UFO07811.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32202-RA | 44..466 | 9..431 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:18:00 Download gff for
UFO07811.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32202-RA | 94..516 | 9..431 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:45 Download gff for
UFO07811.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32202-RA | 94..516 | 9..431 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:03:45 Download gff for
UFO07811.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18682277..18682377 | 9..109 | 100 | -> | Plus |
| 3L | 18682439..18682760 | 110..431 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:18:00 Download gff for
UFO07811.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18675377..18675477 | 9..109 | 100 | -> | Plus |
| arm_3L | 18675539..18675860 | 110..431 | 100 | == | Plus |
