UFO07814.5prime Sequence
1139 bp (1038 high quality bases) assembled on 2011-07-14
> UFO07814.5prime
CAGTCGACATGTCCCTAGAAATCCTGAAACAAGGCGCTGAAGGACGCCTA
TATTTGGGCGATTTCAAAGGAGAAGCCTGCCTGATCAAGGAGCGGTTCGT
AAAGAAGTACCGCCACCCGGAACTGAACACCCAGATCACGCGGCAGCGCA
TGAAAGCGGAGGCCAAGGCATCGGGAAGATGTCTAGCCGCTGGAATCCTG
GCACCAAAGATCCTCCACTCGGACCTCAACACCCACAAGCTGTATATGGA
ATATTTCGATGCAGCCAAGACTGCCAAGCAGTTCATCCAGGAAACAGTGT
CCACTCAGACGGAGGATGAAGCCAAGAAATGTCTGCTGGAGTTCTGCACG
CGGATCGGTGAAATCATTGGGAAAATGCACTCCAATCACATTATACATGG
CGATCTCACCACATCTAACATCCTCATCAATCCGAAGGGTGGCGACTACG
ATGTCATTCTGATTGACTTCGGCTTGAGCCACTACAATCAGGCCACCGAG
GACAAGGGTGTGGATCTGTACGTCCTGGAGCGGGCGCTACTCAGTACGCA
CAGCGAACAGCCGTATATCTTCGAGCACGTCCTGGCCGCCTATCGCACAG
CGTGCGGTAAGGACGAACAGGCAGTGCTCACCAAGTTCGAGGAGGTGCGA
GCACGCGGACGCAAAAGAACCATGATTGGTGCAAGCTTTCTAGACCATTC
GTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATA
ATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGA
TTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATC
CAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCG
AGCTCGATATCAAATTACGCCCCGCCCTGCCCCTCATCGCAGTACTGTGT
AATTCATTAGCATTCTGCCGACATGGAAGCCATCACAAACCGGCATGATG
AACCTGAATCCGCCAGCGGCATCAGCACCCTTGTTCGCCTTGCGCGTATA
TAATTTGCCATGGGTGAACCGGGGCGAAGAAGTGTTCCCTATTGGGCACG
TTAATCAAACTGGGTGAATCTCCCCAGATGCCTGACCAA
UFO07814.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:28:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prpk-RA | 744 | CG10673-RA | 42..713 | 9..680 | 3360 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:28:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 5138683..5139354 | 680..9 | 3360 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:28:21 has no hits.
UFO07814.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:15 Download gff for
UFO07814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10673-RA | 42..716 | 9..684 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:18:27 Download gff for
UFO07814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prpk-RA | 42..716 | 9..684 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:04:03 Download gff for
UFO07814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prpk-RA | 42..716 | 9..684 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:04:03 Download gff for
UFO07814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 5138680..5139354 | 9..684 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:18:27 Download gff for
UFO07814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 5131780..5132454 | 9..684 | 99 | | Minus |
