UFO07818.5prime Sequence
1138 bp (1021 high quality bases) assembled on 2011-07-14
> UFO07818.5prime
CAGTCGACATGGATAAACTGCGAGGCAACAATGCGGCTAGCGAGAATCCC
TTCAAGCGGCCGATGAATGCCCTCCAGAAGCAGTGGTACCGCGTCCTGCT
GGCCCGCCGTGTGGGATTCGGGCAGCGTCCTCCGCCCGACGAAAAGGAGC
TAACGTACGCCGACATTTGTCGTAAGCGCTATGCGGCATCGTTCCGGCGA
TACAACGAGTGTTTCCGCCGGGAAATGGCCAAACATGAGGAGATGCAGCG
ATGCGCCATCGACGCCATGAGGGTACACAGAACCTTTGCCATCACCACAC
TTTGGCTACCTTTGCACTCGAAGCGGGAAATCAACTCAACGCTGGAAACC
CTCGAAAAGGTTCTCACCGCCAAGGAAAGACGACGCCTGCAGGAGATTCT
CAAGCAGGGAGAGTCCTGGCACTCGCACCGCGCAAGCTTTCTAGACCATT
CGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCAT
AATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGG
ATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAAT
CCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGC
GAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTT
GTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGA
TGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATA
TTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGT
TTAAATCAAAACTGGTGAACTCACCCAGGGATTGGCTGAGACGAAAAACA
TATTCTCAATAAACCCTTTAGGAAATAGGCCAGGTTTTCACCGTACACGC
CACATCTTGCGAATATATGTGTAGAAACTGCGAAATCGTCGTGTATCACT
CCAGAGCGATGAAACGTTCAGTTGCCTCATGGAACCGGTGTAACAGGGTG
ACCTATTCCATATCACCAGCCTCACCGTCTTTCATTGCAACCGAATCGGA
TGAAATTTCTCAGCGCAAATGGTGATAGCAGGCGATAA
UFO07818.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:28:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14342-RB | 802 | CG14342-RB | 102..524 | 9..431 | 2115 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:28:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1204316..1204464 | 9..157 | 745 | 100 | Plus |
| 2L | 23513712 | 2L | 1204565..1204687 | 158..280 | 615 | 100 | Plus |
| 2L | 23513712 | 2L | 1204759..1204843 | 277..361 | 425 | 100 | Plus |
| 2L | 23513712 | 2L | 1204899..1204972 | 358..431 | 370 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:28:25 has no hits.
UFO07818.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:16 Download gff for
UFO07818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14342-RB | 76..502 | 9..436 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:18:29 Download gff for
UFO07818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14342-RB | 102..528 | 9..436 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:04:04 Download gff for
UFO07818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14342-RB | 102..528 | 9..436 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:04:04 Download gff for
UFO07818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1204316..1204464 | 9..157 | 100 | -> | Plus |
| 2L | 1204565..1204687 | 158..280 | 100 | -> | Plus |
| 2L | 1204763..1204841 | 281..359 | 100 | -> | Plus |
| 2L | 1204901..1204972 | 360..431 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:18:29 Download gff for
UFO07818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1204763..1204841 | 281..359 | 100 | -> | Plus |
| arm_2L | 1204901..1204972 | 360..431 | 100 | == | Plus |
| arm_2L | 1204316..1204464 | 9..157 | 100 | -> | Plus |
| arm_2L | 1204565..1204687 | 158..280 | 100 | -> | Plus |
