UFO07819.5prime Sequence
1154 bp (1044 high quality bases) assembled on 2011-07-14
> UFO07819.5prime
CAGTCGACATGGATCGTTGGCAGAATCGCGTGGCCGTTATCAGTGGCGCC
AGTTCCGGAATCGGAGCAGCCTGTGCCCGGCTTTTGGTGGCAGCCGGTCT
ACAGGTGGTTGGCCTGGCCCGACGCACCGATCGCCTCGAGCAGCTGCGCC
AATCTTTGCCGGCGGAGCAGAGGATGCGCTTCCATCAGCACAAATGCGAT
GTATCGCAGGAGTTGCAGGTGGACACGGCCTTCGAGTGGATTGAAAAGGA
ACTGGGCGGCATCGATGTGCTGATCAATAATGCGGGCATTGTGCTCGGTG
GCCAGCTGATCGATATGCCCACCAAGGACATCAACAACATACTACAGACG
AATCTCATGGGCAGCATTTACTGCACCAAATTGGCCGCCAGCAGCATGAG
ACGCCGCCAGGTGGCTGGACATCTGATCTTTGTGAATAGCACGGCCGGAG
TGGCCGGTTATAAGCCGGATCCGGCGGATGAGAGCCTCAACGCGTACACG
CCCAGCAAATTTGCCCTGACTGCCGTCCAGGAGATCTGCCGACAGGAGCT
AATCAATCAAGGATCAAAAATTAAGACCACGAGCATCAATCCCGGCTGGG
TGGCCACCGAGATCGTTCCGGACGAAACGAAGGCCAAGCTGGGCGAGGTA
ATCCTCCAGGCGGACGACGTCGCTCAGGCTGTACTGTACGCCCTATCCAC
GCCACCGCACACTCAGGTGGAGCAGATAACGCTGAGGGCGGTGGGCGAAT
ACTTCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGT
GGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAG
ATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGC
GGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACT
GGATCTATCAACAGGAGTCCAGCGGAGCTCGATAATCAATTACGCCCGCC
CTGCCACTCATCGCAGTACTGGTTGTAATTCATAAGCATTCTGCCGACAT
GGAAGCCATCACAAACGCATGATGACTTGAATCCCCAGCCGCTACAGCAC
CTTGTTCGCCTGCGTATATATTTTGCCCATGTGTAACGGGGCGAAAAAGT
TGTC
UFO07819.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:28:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10962-RB | 1074 | CG10962-RB | 29..775 | 9..755 | 3600 | 98.8 | Plus |
| CG9360-RA | 1035 | CG9360-RA | 110..175 | 9..74 | 210 | 87.9 | Plus |
| antdh-RA | 950 | CG1386-RA | 29..168 | 8..147 | 205 | 77.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:28:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8973655..8974227 | 581..9 | 2745 | 98.6 | Minus |
| X | 23542271 | X | 8973207..8973381 | 755..581 | 860 | 99.4 | Minus |
| X | 23542271 | X | 11764416..11764481 | 74..9 | 210 | 87.9 | Minus |
| X | 23542271 | X | 11168891..11169030 | 147..8 | 205 | 76.4 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:28:29 has no hits.
UFO07819.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:16 Download gff for
UFO07819.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10962-RB | 9..770 | 1..761 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:18:31 Download gff for
UFO07819.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10962-RB | 21..782 | 1..761 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:04:07 Download gff for
UFO07819.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10962-RB | 21..782 | 1..761 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:04:07 Download gff for
UFO07819.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8973200..8973380 | 582..761 | 97 | <- | Minus |
| X | 8973655..8974231 | 1..581 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:18:31 Download gff for
UFO07819.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8867233..8867413 | 582..761 | 97 | <- | Minus |
| arm_X | 8867688..8868264 | 1..581 | 97 | | Minus |
