UFO07822.5prime Sequence
1131 bp (965 high quality bases) assembled on 2011-07-14
> UFO07822.5prime
CAGTCGACATGCTGGGCAATCTGTGCCGGCTTGTGGGTGCCCGTTCCCCG
ATCACCAGGCGCTTGCTGCACACGGAGCGGAAAGTTCGGGTGAATGGCTC
AGATTTGAACATTGTGGAGAGCGGCAGTGGGGAGCGGAGTCTACTCCTGA
TGCCGGGAGCACTGGGTTCCTCGTGGACCGACTTTAGGCCCCAGATCGAG
CAGCTGCCGAAACTGCTGCCGGGTCACACCATCATCGCCTGGGATCCGCC
GGGTTATGGCAAATCAGTGCCGCCGCAGCGCAAGTTCGGCCTTGAATTCT
TTCGGGAGGATGCCCAGGCAGCCGTGGATTTGATGCGTGCCCTGGACAGA
CCACGCTTCTCCATTTTGGGCTGGAGCGATGGAGGCATCACGGCGCTTAT
AGTCGCAGGTCGCCATGCGGAAGCTGTGGATCGCCTAGCAATCTGGGGAG
CAGGTGCCTACTTGAACGCCGACGAAGTCAAGGCCCTTAAGAACATTCGG
GATGTAGCCAAGTGGTCGCCGCGCATGCGTGAGCCCATGGAAAAGGTTTA
CGGCGTCGAAAGATTCCCCCAATTGTGGGCCGAATGGGTGGACGCCGCAT
GCGCCTTCTATGACCAACGGGATGGAGACTTCTGTCGCACCGAAGTTGAG
AAAATAAAGATACCTACTTTTATACTCCACGGAAAGAAGGATCCCATGAT
AGCAGCGGAGCACATTCCTTGGCTGAGGGAGCGTTTGCCTCATGCGGAAT
ATTATGAGTTCCCCGAGGGGAAGCATAATATCCATTTACGTTATGCGGAG
GAGTTTAACAAACTGGTGGCCGATTTCTTTAACAAAAATAACGCAAGCTT
TCTAGACCATTCGTTTGGCGCGCGGGCCCAGTTAAGTGGTCATAATCATA
ATCATAATCATAATCATAATCACACTAGCCCTAGGAGATCCTGGTCATGA
CTAGTGCTTGGAATTCTTCACCATTAAAAAACGCCCGGCGCAACCGAGCG
TTCTTGAACAAATTCCAGATTGAAGTCTTGAGTCATTACTGGATTCCTAT
CACAGGAGTCCAAGCGAGCTCGGAATTCAAATTACGCCCCCGCCCTGCCA
CTCATCGCGAGTCTGTGTGTATTTTCATTTA
UFO07822.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:28:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5377-RA | 1253 | CG5377-RA | 176..1009 | 9..842 | 4080 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:28:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22467149..22467982 | 842..9 | 4080 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:28:06 has no hits.
UFO07822.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:12 Download gff for
UFO07822.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5377-RA | 142..985 | 1..850 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:18:17 Download gff for
UFO07822.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5377-RA | 172..1015 | 1..850 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:56 Download gff for
UFO07822.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5377-RA | 172..1015 | 1..850 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:03:56 Download gff for
UFO07822.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22467149..22467986 | 1..844 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:18:17 Download gff for
UFO07822.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18292871..18293708 | 1..844 | 98 | | Minus |
