UFO07823.5prime Sequence
1129 bp (985 high quality bases) assembled on 2011-07-14
> UFO07823.5prime
CAGTCGACATGGCAGCAAAAGTAGCGAGCGGCACGAACAAAGTGTTCCAG
AACCACGATGACGTGCACATCTCCTTCGAGGATCAGCAGCGGATCAACCG
CTTTGCGAAGCACAACGCCCGCATGGATGACTTCAAAGCGGAGCTGGAAA
CGAAGCGCAATGAGCTGAAGAGCTTGGAGGAGGCGCTGGAGGAGATTGAG
CTGTTCGACGAGGACGAGGACATACCGTTCCTGGTTGGCGAGGTGTTCCT
CTCGCACAAGCTGGAGAAAACACAGGACATGCTGAAGGAGACCAAGGAGC
AGGTGCTCAAGGAGATCGCCGGCGTGGAAGCCAAGGCGAAGGTTATCAAG
GCGGAAATGGACGAGCTGAAGGCTCATCTGTATCAGCGATTCGGCAGCAA
TATCTCACTAGAGGCCGAGGATGCAAGCTTTCTAGACCATTCGTTTGGCG
CGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAAT
CACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACC
AATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGA
GTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGAT
ATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCAT
TAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGA
ATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCAT
GGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAA
AACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAACATATTCTCAA
TAAACCCTTTAGGGAAATAGGCCAGGTTTCACCGTAACACGCCACATCTT
GCGATATTATGTTGTAAGAACTGCCGGGAAATCGTCGTGTATTCACTCCA
GAGCGATGAAAACGTTTCAGTTTGCTCATGAAACGGTGTACAAGGGTGAA
CCTATCATATTCACAGCTCACGTCTTTCATGCTCGAATCGGAGTGACATC
TCAGCGCAAAGTGATAGGCCGATAACTTG
UFO07823.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:28:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10635-RA | 543 | CG10635-RA | 65..478 | 9..422 | 2010 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:28:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 5367406..5367774 | 422..54 | 1785 | 98.9 | Minus |
| 3L | 28110227 | 3L | 5367900..5367944 | 53..9 | 225 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:28:10 has no hits.
UFO07823.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:13 Download gff for
UFO07823.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10635-RA | 65..481 | 9..426 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:18:20 Download gff for
UFO07823.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10635-RA | 65..481 | 9..426 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:58 Download gff for
UFO07823.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10635-RA | 65..481 | 9..426 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:03:58 Download gff for
UFO07823.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 5367900..5367944 | 9..53 | 100 | | Minus |
| 3L | 5367406..5367774 | 54..422 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:18:20 Download gff for
UFO07823.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 5360506..5360874 | 54..422 | 98 | <- | Minus |
| arm_3L | 5361000..5361044 | 9..53 | 100 | | Minus |
