UFO07827.5prime Sequence
909 bp (908 high quality bases) assembled on 2011-07-14
> UFO07827.5prime
CAGTCGACATGTGCCAAACAATGCGTTGCATCCTGGTTGCCTGTGTGGCC
CTTGCCCTCCTAGCCGCCGGCTGCCGAGTGGAGGCGTCCAACTCCAGACC
TCCGCGAAAGAACGATGTCAACACTATGGCTGATGCCTACAAGTTCCTGC
AGGATCTGGACACCTACTACGGCGACAGAGCCCGCGTTCGGTTCGGAAAG
CGCGGATCGCTGATGGATATCCTGAGGAATCACGAGATGGACAACATAAA
TCTAGGAAAAAATGCCAACAATGGAGGAGAATTTGCTCGCGGTTTTAATG
AGGAGGAGATATTCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCC
CAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTA
GCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAA
ACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAG
GTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATT
ACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATT
CTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAG
CGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAA
CGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTTAATCAAAACTGGTG
AAACTCACCCAGGGATTGGCTGAGACGAAAACATATTTCTCAATAAACCC
TTTAGGGAAATAGGCAGGTTTTCACCGTAACACGCCACATCTTGCGAATA
TATGTGTAGAACTGCCCGGAAATCGTCGTGGTATTCACTCCAGAGCGATG
AAACGTTTC
UFO07827.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:28:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NPF-RC | 579 | CG10342-RC | 86..391 | 9..314 | 1530 | 100 | Plus |
| NPF-RB | 518 | CG10342-RB | 25..330 | 9..314 | 1530 | 100 | Plus |
| NPF-RA | 569 | CG10342-RA | 76..381 | 9..314 | 1530 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:28:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16610779..16611055 | 9..285 | 1385 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:28:53 has no hits.
UFO07827.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:20 Download gff for
UFO07827.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| npf-RA | 68..383 | 1..318 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:18:45 Download gff for
UFO07827.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| npf-RA | 69..384 | 1..318 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:04:18 Download gff for
UFO07827.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NPF-RA | 69..384 | 1..318 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:04:18 Download gff for
UFO07827.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16610779..16611054 | 9..284 | 100 | -> | Plus |
| 3R | 16611108..16611137 | 285..314 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:18:45 Download gff for
UFO07827.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12436501..12436776 | 9..284 | 100 | -> | Plus |
| arm_3R | 12436830..12436859 | 285..314 | 100 | == | Plus |
