UFO07828.5prime Sequence
1126 bp (1014 high quality bases) assembled on 2011-07-14
> UFO07828.5prime
CAGTCGACATGGAGGATTGGAAATCGGAGGAAATGGCAAGGAAAAGAAAC
AGGAATAGGAGCAAGCAGCGCAGACGAAGGCAGAAAAGTGAGGGAAAGCC
GAAGCCACATACATCTCGAGATCAGTGGAGCAATGTGGCTCAAATATACC
AAAGCCTTTTTGAATGGCACCACAATCATGTTATGAGTCTCTGCCCTGAG
GTTAATCCGAATCTGGATCAGGACCTTGAGGATATTCCCAAGGAAACAGG
AACGTTTCACTGCCTGGACTACGTGTACGAGAGTTCTTCCGAGGATGAGG
AGATCGAACCCATTGACGAAGGCTATCTGAAGTTCCTCGAGGTGACCATT
AAGCATCAGCAGGAACTCAGGGATCGAAGAACTGCCCAAACCACCGACTC
TTTAGATGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAA
GTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGG
AGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCG
GCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTA
CTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCC
GCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGA
CATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATC
AGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGC
GAAGAATTGTCCATATTGGCCACGTTTAAATCAAACTGGTGAAACTCACC
CAGGGATTGGCTGAGACGAAAACATATTCTCATAAACCCTTTAGGAAATA
GGCCAGGTTTCACCGTAACACGCCACATCTTGCGATATATGTGTAGAACT
GCGGAATCGTCGTGTATTCACTCAGAGCGATGAAACGTTTCAGGTTGCTC
ATGGAAACGGTGGTACAAGGTGACCACTATCCCAATATCACAGCTTCACG
TCTTTCATTGCATACGAAATCGGATGAGCATCATCAAGCGGCAGATGTGA
ATATGCGATAAACTGGGCGTATTTCT
UFO07828.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:28:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13689-RA | 683 | CG13689-RA | 59..457 | 9..407 | 1980 | 99.7 | Plus |
| CG13689-RB | 1494 | CG13689-RB | 135..400 | 142..407 | 1315 | 99.6 | Plus |
| CG13689-RB | 1494 | CG13689-RB | 59..137 | 9..87 | 395 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:28:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 603074..603336 | 145..407 | 1300 | 99.6 | Plus |
| 2L | 23513712 | 2L | 602871..603006 | 9..144 | 680 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:28:56 has no hits.
UFO07828.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:22:21 Download gff for
UFO07828.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13689-RA | 53..457 | 1..407 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:18:47 Download gff for
UFO07828.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13689-RA | 53..457 | 1..407 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:04:21 Download gff for
UFO07828.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13689-RA | 53..457 | 1..407 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:04:21 Download gff for
UFO07828.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 602865..603006 | 1..144 | 97 | -> | Plus |
| 2L | 603074..603336 | 145..407 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:18:47 Download gff for
UFO07828.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 602865..603006 | 1..144 | 97 | -> | Plus |
| arm_2L | 603074..603336 | 145..407 | 99 | == | Plus |
